{"payload":{"feedbackUrl":"https://github.com/orgs/community/discussions/53140","repo":{"id":276920766,"defaultBranch":"master","name":"sqzlib","ownerLogin":"7PintsOfCherryGarcia","currentUserCanPush":false,"isFork":false,"isEmpty":false,"createdAt":"2020-07-03T14:36:43.000Z","ownerAvatar":"https://avatars.githubusercontent.com/u/42513628?v=4","public":true,"private":false,"isOrgOwned":false},"refInfo":{"name":"","listCacheKey":"v0:1684764935.760847","currentOid":""},"activityList":{"items":[{"before":"7458fad1f2ccc762dc6e7643215540ea9715c4b2","after":"5c2415c8c566de69610378611f49053b3b073035","ref":"refs/heads/index","pushedAt":"2023-06-26T12:58:09.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"7PintsOfCherryGarcia","name":"Julian Regalado Perez","path":"/7PintsOfCherryGarcia","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/42513628?s=80&v=4"},"commit":{"message":"Fixed unclose filehandle","shortMessageHtmlLink":"Fixed unclose filehandle"}},{"before":"ad8bd61aa9198fe4d5a531319c3c3e0613532c48","after":"7458fad1f2ccc762dc6e7643215540ea9715c4b2","ref":"refs/heads/index","pushedAt":"2023-05-23T15:46:17.048Z","pushType":"push","commitsCount":1,"pusher":{"login":"7PintsOfCherryGarcia","name":"Julian Regalado Perez","path":"/7PintsOfCherryGarcia","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/42513628?s=80&v=4"},"commit":{"message":"Bugfix\n\nSmall error in sqzread where exact buffer size matching was not considered.","shortMessageHtmlLink":"Bugfix"}},{"before":null,"after":"ad8bd61aa9198fe4d5a531319c3c3e0613532c48","ref":"refs/heads/index","pushedAt":"2023-05-22T14:15:35.760Z","pushType":"branch_creation","commitsCount":0,"pusher":{"login":"7PintsOfCherryGarcia","name":"Julian Regalado Perez","path":"/7PintsOfCherryGarcia","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/42513628?s=80&v=4"},"commit":{"message":"Started code to index sqz files","shortMessageHtmlLink":"Started code to index sqz files"}},{"before":"1b4cfc5464309a735a3559cae6a31c5ebf35f4fd","after":"9f70c66c08c41d667768f6323ab7b820c867287d","ref":"refs/heads/dev","pushedAt":"2023-05-22T09:55:24.626Z","pushType":"push","commitsCount":1,"pusher":{"login":"7PintsOfCherryGarcia","name":"Julian Regalado Perez","path":"/7PintsOfCherryGarcia","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/42513628?s=80&v=4"},"commit":{"message":"Small bugfix\n\nIncreased size of name buffer. Now sequence IDs of up to 1 kb are supported","shortMessageHtmlLink":"Small bugfix"}},{"before":"7588b914716379e313bcdba92f1022dc757694bd","after":"1b4cfc5464309a735a3559cae6a31c5ebf35f4fd","ref":"refs/heads/dev","pushedAt":"2023-04-27T14:50:44.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"7PintsOfCherryGarcia","name":"Julian Regalado Perez","path":"/7PintsOfCherryGarcia","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/42513628?s=80&v=4"},"commit":{"message":"kseq API now working","shortMessageHtmlLink":"kseq API now working"}},{"before":"9d524d0fd86fb7ea20b18bec521b4fb5eb12b93b","after":"7588b914716379e313bcdba92f1022dc757694bd","ref":"refs/heads/dev","pushedAt":"2023-04-26T14:26:07.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"7PintsOfCherryGarcia","name":"Julian Regalado Perez","path":"/7PintsOfCherryGarcia","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/42513628?s=80&v=4"},"commit":{"message":"Implementing new API into sqzread\n\nFor kseq compatibility","shortMessageHtmlLink":"Implementing new API into sqzread"}},{"before":"eea7a0ec39a92def6582dddb44ea7c3874fdd3a6","after":"9d524d0fd86fb7ea20b18bec521b4fb5eb12b93b","ref":"refs/heads/master","pushedAt":"2023-04-25T13:17:36.000Z","pushType":"push","commitsCount":26,"pusher":{"login":"7PintsOfCherryGarcia","name":"Julian Regalado Perez","path":"/7PintsOfCherryGarcia","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/42513628?s=80&v=4"},"commit":{"message":"Removed kseq header dependency from sqz\n\nsqzFile now has a kseq object for loading","shortMessageHtmlLink":"Removed kseq header dependency from sqz"}},{"before":"03ae70356bd4aa5e582822d0c711df205df2fb2d","after":"9d524d0fd86fb7ea20b18bec521b4fb5eb12b93b","ref":"refs/heads/dev","pushedAt":"2023-04-25T13:16:35.000Z","pushType":"push","commitsCount":13,"pusher":{"login":"7PintsOfCherryGarcia","name":"Julian Regalado Perez","path":"/7PintsOfCherryGarcia","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/42513628?s=80&v=4"},"commit":{"message":"Removed kseq header dependency from sqz\n\nsqzFile now has a kseq object for loading","shortMessageHtmlLink":"Removed kseq header dependency from sqz"}},{"before":"b3bf741e910348d8a0867682942db9eeba01a2fa","after":"9d524d0fd86fb7ea20b18bec521b4fb5eb12b93b","ref":"refs/heads/noDoublePass","pushedAt":"2023-04-25T13:16:05.000Z","pushType":"push","commitsCount":2,"pusher":{"login":"7PintsOfCherryGarcia","name":"Julian Regalado Perez","path":"/7PintsOfCherryGarcia","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/42513628?s=80&v=4"},"commit":{"message":"Removed kseq header dependency from sqz\n\nsqzFile now has a kseq object for loading","shortMessageHtmlLink":"Removed kseq header dependency from sqz"}},{"before":"2f246afe2d8b2fb2f3d10a83b8254b3741084c5c","after":"b3bf741e910348d8a0867682942db9eeba01a2fa","ref":"refs/heads/noDoublePass","pushedAt":"2023-04-24T13:54:57.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"7PintsOfCherryGarcia","name":"Julian Regalado Perez","path":"/7PintsOfCherryGarcia","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/42513628?s=80&v=4"},"commit":{"message":"ALmost done with fastq encoding and decoding\n\nOnly missing printing of quality values","shortMessageHtmlLink":"ALmost done with fastq encoding and decoding"}},{"before":"872dc8b23ba1ff3f8fc4638e7917066551c4dfed","after":"2f246afe2d8b2fb2f3d10a83b8254b3741084c5c","ref":"refs/heads/noDoublePass","pushedAt":"2023-04-20T14:54:02.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"7PintsOfCherryGarcia","name":"Julian Regalado Perez","path":"/7PintsOfCherryGarcia","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/42513628?s=80&v=4"},"commit":{"message":"BUG fix\n\nWhen decoding fastX was overcounting decoded bytes","shortMessageHtmlLink":"BUG fix"}},{"before":"1b00525d40abbb11e261a786b513d56dabd1250e","after":"872dc8b23ba1ff3f8fc4638e7917066551c4dfed","ref":"refs/heads/noDoublePass","pushedAt":"2023-04-19T14:33:42.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"7PintsOfCherryGarcia","name":"Julian Regalado Perez","path":"/7PintsOfCherryGarcia","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/42513628?s=80&v=4"},"commit":{"message":"FASTA coding/decoding working with new API\n\nI get really hacky sometimes.","shortMessageHtmlLink":"FASTA coding/decoding working with new API"}},{"before":"ab464f961f1587c1cfd7867a2fe5d66a228ae017","after":"1b00525d40abbb11e261a786b513d56dabd1250e","ref":"refs/heads/noDoublePass","pushedAt":"2023-04-18T14:45:03.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"7PintsOfCherryGarcia","name":"Julian Regalado Perez","path":"/7PintsOfCherryGarcia","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/42513628?s=80&v=4"},"commit":{"message":"Major changes to decoding API\n\nMuch more simple. Avoiding all my previous hackery :)","shortMessageHtmlLink":"Major changes to decoding API"}},{"before":"03daea2599411f3c392dd30d376b9e76ce528ffd","after":"ab464f961f1587c1cfd7867a2fe5d66a228ae017","ref":"refs/heads/noDoublePass","pushedAt":"2023-04-17T15:33:38.000Z","pushType":"push","commitsCount":2,"pusher":{"login":"7PintsOfCherryGarcia","name":"Julian Regalado Perez","path":"/7PintsOfCherryGarcia","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/42513628?s=80&v=4"},"commit":{"message":"More bugs\n\nCan't make this work!!!","shortMessageHtmlLink":"More bugs"}},{"before":"da5c0b6e06982cc8a65189dfc24eb2615a6f087e","after":"03daea2599411f3c392dd30d376b9e76ce528ffd","ref":"refs/heads/noDoublePass","pushedAt":"2023-04-14T17:47:23.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"7PintsOfCherryGarcia","name":"Julian Regalado Perez","path":"/7PintsOfCherryGarcia","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/42513628?s=80&v=4"},"commit":{"message":"Working on decoding with new API","shortMessageHtmlLink":"Working on decoding with new API"}},{"before":"f5265b383b854af4c126afa81ae1d1dd9234d7a0","after":"da5c0b6e06982cc8a65189dfc24eb2615a6f087e","ref":"refs/heads/noDoublePass","pushedAt":"2023-04-13T15:21:25.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"7PintsOfCherryGarcia","name":"Julian Regalado Perez","path":"/7PintsOfCherryGarcia","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/42513628?s=80&v=4"},"commit":{"message":"Fixed loading of fastq data\n\nMore API changes to reflect the new use of buffers","shortMessageHtmlLink":"Fixed loading of fastq data"}},{"before":"3e47cefc5dc0226fa4a0c8ed651707eec4489f5a","after":"f5265b383b854af4c126afa81ae1d1dd9234d7a0","ref":"refs/heads/noDoublePass","pushedAt":"2023-04-12T14:18:10.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"7PintsOfCherryGarcia","name":"Julian Regalado Perez","path":"/7PintsOfCherryGarcia","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/42513628?s=80&v=4"},"commit":{"message":"Encoding fastA working\n\nAfter a couple of API changes and resquashing a bug that had been squashed\nbefore and I reintrodiced.","shortMessageHtmlLink":"Encoding fastA working"}},{"before":"531c90a5e6aec6fd92cf56908635a769a8dfac77","after":"3e47cefc5dc0226fa4a0c8ed651707eec4489f5a","ref":"refs/heads/noDoublePass","pushedAt":"2023-04-11T15:05:56.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"7PintsOfCherryGarcia","name":"Julian Regalado Perez","path":"/7PintsOfCherryGarcia","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/42513628?s=80&v=4"},"commit":{"message":"More low level API changes\n\nMoving from random pointers as buffers to better defined structs","shortMessageHtmlLink":"More low level API changes"}},{"before":null,"after":"531c90a5e6aec6fd92cf56908635a769a8dfac77","ref":"refs/heads/noDoublePass","pushedAt":"2023-04-06T14:55:05.000Z","pushType":"branch_creation","commitsCount":0,"pusher":{"login":"7PintsOfCherryGarcia","name":"Julian Regalado Perez","path":"/7PintsOfCherryGarcia","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/42513628?s=80&v=4"},"commit":{"message":"New branch for algorithm optimization\n\nReimplementing encoding routine that goes through sequences twice. Once to\ndetect non ACGT bases and then again to encode the sequence. The idea is to only\nloop over the sequence once.","shortMessageHtmlLink":"New branch for algorithm optimization"}},{"before":"85e98199a125218b40caf2e8a459b6f62bb34cb2","after":"03ae70356bd4aa5e582822d0c711df205df2fb2d","ref":"refs/heads/dev","pushedAt":"2023-04-05T16:01:58.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"7PintsOfCherryGarcia","name":"Julian Regalado Perez","path":"/7PintsOfCherryGarcia","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/42513628?s=80&v=4"},"commit":{"message":"New bug\n\nEncoding buffer overflow whith last sequence","shortMessageHtmlLink":"New bug"}},{"before":"6adabaa518f4f09a18c5a55afe55dd439c72f9cb","after":"85e98199a125218b40caf2e8a459b6f62bb34cb2","ref":"refs/heads/dev","pushedAt":"2023-04-03T15:41:07.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"7PintsOfCherryGarcia","name":"Julian Regalado Perez","path":"/7PintsOfCherryGarcia","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/42513628?s=80&v=4"},"commit":{"message":"Bug detection\n\nWhen loading very large sequences, > 32 mb, buffers are not large enough.\nWorking on dynamic resizing at load time.","shortMessageHtmlLink":"Bug detection"}},{"before":"22fc11c718dcc9c0a0a2fb469e7047488859a472","after":"6adabaa518f4f09a18c5a55afe55dd439c72f9cb","ref":"refs/heads/dev","pushedAt":"2023-03-30T14:27:51.273Z","pushType":"push","commitsCount":1,"pusher":{"login":"7PintsOfCherryGarcia","name":"Julian Regalado Perez","path":"/7PintsOfCherryGarcia","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/42513628?s=80&v=4"},"commit":{"message":"Mayor bugfixes\n\nRetaking the project after a while. Refactoring some code and mekingthings more\nconcise","shortMessageHtmlLink":"Mayor bugfixes"}},{"before":"932bad083b5fa0db4976099c99a1260b18d85618","after":"22fc11c718dcc9c0a0a2fb469e7047488859a472","ref":"refs/heads/dev","pushedAt":"2023-03-27T14:35:26.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"7PintsOfCherryGarcia","name":"Julian Regalado Perez","path":"/7PintsOfCherryGarcia","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/42513628?s=80&v=4"},"commit":{"message":"Changed the pthreads naming scheme","shortMessageHtmlLink":"Changed the pthreads naming scheme"}},{"before":"bf690ef5af59c762a402eb97eaf49a1f4589aa0f","after":"932bad083b5fa0db4976099c99a1260b18d85618","ref":"refs/heads/dev","pushedAt":"2023-03-27T14:35:03.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"7PintsOfCherryGarcia","name":"Julian Regalado Perez","path":"/7PintsOfCherryGarcia","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/42513628?s=80&v=4"},"commit":{"message":"Started redevelopment to finally push this","shortMessageHtmlLink":"Started redevelopment to finally push this"}}],"hasNextPage":false,"hasPreviousPage":false,"activityType":"all","actor":null,"timePeriod":"all","sort":"DESC","perPage":30,"cursor":"Y3Vyc29yOnYyOpK7MjAyMy0wNi0yNlQxMjo1ODowOS4wMDAwMDBazwAAAANJFW-3","startCursor":"Y3Vyc29yOnYyOpK7MjAyMy0wNi0yNlQxMjo1ODowOS4wMDAwMDBazwAAAANJFW-3","endCursor":"Y3Vyc29yOnYyOpK7MjAyMy0wMy0yN1QxNDozNTowMy4wMDAwMDBazwAAAAMMHzu5"}},"title":"Activity ยท 7PintsOfCherryGarcia/sqzlib"}