{"payload":{"feedbackUrl":"https://github.com/orgs/community/discussions/53140","repo":{"id":447297455,"defaultBranch":"main","name":"RENEE","ownerLogin":"CCBR","currentUserCanPush":false,"isFork":false,"isEmpty":false,"createdAt":"2022-01-12T16:49:27.000Z","ownerAvatar":"https://avatars.githubusercontent.com/u/10426639?v=4","public":true,"private":false,"isOrgOwned":true},"refInfo":{"name":"","listCacheKey":"v0:1726584937.0","currentOid":""},"activityList":{"items":[{"before":"16b3c50f74983d2bcce1e80e573eb7b74b87ebe9","after":"69a9c8af8859fd191130f63eee25f1596b5134c8","ref":"refs/heads/print-base","pushedAt":"2024-09-17T19:32:12.000Z","pushType":"push","commitsCount":2,"pusher":{"login":"kelly-sovacool","name":"Kelly Sovacool, PhD","path":"/kelly-sovacool","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/17768269?s=80&v=4"},"commit":{"message":"chore: remove unneeded snaketools pkg","shortMessageHtmlLink":"chore: remove unneeded snaketools pkg"}},{"before":null,"after":"16b3c50f74983d2bcce1e80e573eb7b74b87ebe9","ref":"refs/heads/print-base","pushedAt":"2024-09-17T14:55:37.000Z","pushType":"branch_creation","commitsCount":0,"pusher":{"login":"kelly-sovacool","name":"Kelly Sovacool, PhD","path":"/kelly-sovacool","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/17768269?s=80&v=4"},"commit":{"message":"fix: add debug command to print the base dir","shortMessageHtmlLink":"fix: add debug command to print the base dir"}},{"before":"30f9d98e73feec7b7b1bac5c3fcc47fccb55134c","after":null,"ref":"refs/heads/release/v2.6.0","pushedAt":"2024-09-09T23:01:10.000Z","pushType":"branch_deletion","commitsCount":0,"pusher":{"login":"kelly-sovacool","name":"Kelly Sovacool, PhD","path":"/kelly-sovacool","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/17768269?s=80&v=4"}},{"before":"a13d6c40d24607625e67bf0897c3d07ee404c826","after":"12744b5db8be8b56dca58c5ae60a28d75f65a2e0","ref":"refs/heads/main","pushedAt":"2024-09-09T23:01:08.000Z","pushType":"pr_merge","commitsCount":3,"pusher":{"login":"kelly-sovacool","name":"Kelly Sovacool, PhD","path":"/kelly-sovacool","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/17768269?s=80&v=4"},"commit":{"message":"Merge pull request #158 from CCBR/release/v2.6.0\n\nchore: 🤖 prepare release v2.6.0","shortMessageHtmlLink":"Merge pull request <a class=\"issue-link js-issue-link\" data-error-text=\"Failed to load title\" data-id=\"2515054893\" data-permission-text=\"Title is private\" data-url=\"https://github.com/CCBR/RENEE/issues/158\" data-hovercard-type=\"pull_request\" data-hovercard-url=\"/CCBR/RENEE/pull/158/hovercard\" href=\"https://github.com/CCBR/RENEE/pull/158\">#158</a> from CCBR/release/v2.6.0"}},{"before":"b7f3297f99987417021f3b3db778a73ce9ff9ea2","after":null,"ref":"refs/heads/release-draft","pushedAt":"2024-09-09T22:44:41.000Z","pushType":"branch_deletion","commitsCount":0,"pusher":{"login":"github-actions[bot]","name":null,"path":"/apps/github-actions","primaryAvatarUrl":"https://avatars.githubusercontent.com/in/15368?s=80&v=4"}},{"before":null,"after":"30f9d98e73feec7b7b1bac5c3fcc47fccb55134c","ref":"refs/heads/release/v2.6.0","pushedAt":"2024-09-09T22:44:39.000Z","pushType":"branch_creation","commitsCount":0,"pusher":{"login":"github-actions[bot]","name":null,"path":"/apps/github-actions","primaryAvatarUrl":"https://avatars.githubusercontent.com/in/15368?s=80&v=4"},"commit":{"message":"chore: bump changelog & version after release of v2.6.0","shortMessageHtmlLink":"chore: bump changelog &amp; version after release of v2.6.0"}},{"before":"c842a3e458562358e81d349d3f7a384edb62f9f3","after":"e4e3111714863762fde1aac16171081519b2504d","ref":"refs/heads/gh-pages","pushedAt":"2024-09-09T22:44:37.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"github-actions[bot]","name":null,"path":"/apps/github-actions","primaryAvatarUrl":"https://avatars.githubusercontent.com/in/15368?s=80&v=4"},"commit":{"message":"Deployed b7f3297 to 2.6 with MkDocs 1.6.1 and mike 2.1.3","shortMessageHtmlLink":"Deployed <a class=\"commit-link\" data-hovercard-type=\"commit\" data-hovercard-url=\"https://github.com/CCBR/RENEE/commit/b7f3297f99987417021f3b3db778a73ce9ff9ea2/hovercard\" href=\"https://github.com/CCBR/RENEE/commit/b7f3297f99987417021f3b3db778a73ce9ff9ea2\"><tt>b7f3297</tt></a> to 2.6 with MkDocs 1.6.1 and mike 2.1.3"}},{"before":null,"after":"b7f3297f99987417021f3b3db778a73ce9ff9ea2","ref":"refs/heads/release-draft","pushedAt":"2024-09-09T20:24:33.000Z","pushType":"branch_creation","commitsCount":0,"pusher":{"login":"github-actions[bot]","name":null,"path":"/apps/github-actions","primaryAvatarUrl":"https://avatars.githubusercontent.com/in/15368?s=80&v=4"},"commit":{"message":"chore: 🤖 prepare release v2.6.0","shortMessageHtmlLink":"chore: 🤖 prepare release v2.6.0"}},{"before":"73be44eaa28ec31b19cd7a4e7de94b76f0eaab8a","after":"a13d6c40d24607625e67bf0897c3d07ee404c826","ref":"refs/heads/main","pushedAt":"2024-08-27T19:44:37.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"kelly-sovacool","name":"Kelly Sovacool, PhD","path":"/kelly-sovacool","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/17768269?s=80&v=4"},"commit":{"message":"ci: use main branch for post-release.yml","shortMessageHtmlLink":"ci: use main branch for post-release.yml"}},{"before":"1dd9309e91fbbd6171b790566a5ef628398e5adb","after":"73be44eaa28ec31b19cd7a4e7de94b76f0eaab8a","ref":"refs/heads/main","pushedAt":"2024-08-27T19:44:17.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"kelly-sovacool","name":"Kelly Sovacool, PhD","path":"/kelly-sovacool","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/17768269?s=80&v=4"},"commit":{"message":"ci: use main branch for draft-release.yml","shortMessageHtmlLink":"ci: use main branch for draft-release.yml"}},{"before":"8ddf85c4d17239c4df1ef8de188eb4618b7965a4","after":"c842a3e458562358e81d349d3f7a384edb62f9f3","ref":"refs/heads/gh-pages","pushedAt":"2024-08-27T19:29:45.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"github-actions[bot]","name":null,"path":"/apps/github-actions","primaryAvatarUrl":"https://avatars.githubusercontent.com/in/15368?s=80&v=4"},"commit":{"message":"Deployed 1dd9309 to dev with MkDocs 1.6.0 and mike 2.1.3","shortMessageHtmlLink":"Deployed <a class=\"commit-link\" data-hovercard-type=\"commit\" data-hovercard-url=\"https://github.com/CCBR/RENEE/commit/1dd9309e91fbbd6171b790566a5ef628398e5adb/hovercard\" href=\"https://github.com/CCBR/RENEE/commit/1dd9309e91fbbd6171b790566a5ef628398e5adb\"><tt>1dd9309</tt></a> to dev with MkDocs 1.6.0 and mike 2.1.3"}},{"before":"a7d6ebcca973b5a7de07aab6cd14ed16266b2120","after":null,"ref":"refs/heads/iss-129","pushedAt":"2024-08-27T19:29:05.000Z","pushType":"branch_deletion","commitsCount":0,"pusher":{"login":"kelly-sovacool","name":"Kelly Sovacool, PhD","path":"/kelly-sovacool","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/17768269?s=80&v=4"}},{"before":"03e5dd95a7552c2c0dcc692edca6c7ccb7eced31","after":"1dd9309e91fbbd6171b790566a5ef628398e5adb","ref":"refs/heads/main","pushedAt":"2024-08-27T19:29:03.000Z","pushType":"pr_merge","commitsCount":27,"pusher":{"login":"kelly-sovacool","name":"Kelly Sovacool, PhD","path":"/kelly-sovacool","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/17768269?s=80&v=4"},"commit":{"message":"Merge pull request #136 from CCBR/iss-129\n\nRe-build human genome annotations with GDC fasta","shortMessageHtmlLink":"Merge pull request <a class=\"issue-link js-issue-link\" data-error-text=\"Failed to load title\" data-id=\"2367041870\" data-permission-text=\"Title is private\" data-url=\"https://github.com/CCBR/RENEE/issues/136\" data-hovercard-type=\"pull_request\" data-hovercard-url=\"/CCBR/RENEE/pull/136/hovercard\" href=\"https://github.com/CCBR/RENEE/pull/136\">#136</a> from CCBR/iss-129"}},{"before":"1cbe90055d16930e0d263eb47399a89599a95b99","after":"8ddf85c4d17239c4df1ef8de188eb4618b7965a4","ref":"refs/heads/gh-pages","pushedAt":"2024-08-27T19:04:04.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"github-actions[bot]","name":null,"path":"/apps/github-actions","primaryAvatarUrl":"https://avatars.githubusercontent.com/in/15368?s=80&v=4"},"commit":{"message":"Deployed 03e5dd9 to dev with MkDocs 1.6.0 and mike 2.1.3","shortMessageHtmlLink":"Deployed <a class=\"commit-link\" data-hovercard-type=\"commit\" data-hovercard-url=\"https://github.com/CCBR/RENEE/commit/03e5dd95a7552c2c0dcc692edca6c7ccb7eced31/hovercard\" href=\"https://github.com/CCBR/RENEE/commit/03e5dd95a7552c2c0dcc692edca6c7ccb7eced31\"><tt>03e5dd9</tt></a> to dev with MkDocs 1.6.0 and mike 2.1.3"}},{"before":"827ca7677a570580c38f5e392b9431e2dca8d40d","after":null,"ref":"refs/heads/rsem-isoform-matrix","pushedAt":"2024-08-27T19:03:24.000Z","pushType":"branch_deletion","commitsCount":0,"pusher":{"login":"kelly-sovacool","name":"Kelly Sovacool, PhD","path":"/kelly-sovacool","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/17768269?s=80&v=4"}},{"before":"d26e6d16870927d82a950b13653354681b3f20b8","after":"03e5dd95a7552c2c0dcc692edca6c7ccb7eced31","ref":"refs/heads/main","pushedAt":"2024-08-27T19:03:22.000Z","pushType":"pr_merge","commitsCount":5,"pusher":{"login":"kelly-sovacool","name":"Kelly Sovacool, PhD","path":"/kelly-sovacool","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/17768269?s=80&v=4"},"commit":{"message":"Merge pull request #149 from CCBR/rsem-isoform-matrix\n\nfeat: rsem-generate-data-matrix for genes & isoforms","shortMessageHtmlLink":"Merge pull request <a class=\"issue-link js-issue-link\" data-error-text=\"Failed to load title\" data-id=\"2449193929\" data-permission-text=\"Title is private\" data-url=\"https://github.com/CCBR/RENEE/issues/149\" data-hovercard-type=\"pull_request\" data-hovercard-url=\"/CCBR/RENEE/pull/149/hovercard\" href=\"https://github.com/CCBR/RENEE/pull/149\">#149</a> from CCBR/rsem-isoform-matrix"}},{"before":"ad02248f08ca0d2dc07ef8cb1e806e647ddb39e4","after":null,"ref":"refs/heads/tools-version","pushedAt":"2024-08-27T17:01:19.000Z","pushType":"branch_deletion","commitsCount":0,"pusher":{"login":"kelly-sovacool","name":"Kelly Sovacool, PhD","path":"/kelly-sovacool","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/17768269?s=80&v=4"}},{"before":"5b9daeb85a0c0998c9cd81502b724b79bb2c1e5e","after":"d26e6d16870927d82a950b13653354681b3f20b8","ref":"refs/heads/main","pushedAt":"2024-08-27T17:01:17.000Z","pushType":"pr_merge","commitsCount":2,"pusher":{"login":"kelly-sovacool","name":"Kelly Sovacool, PhD","path":"/kelly-sovacool","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/17768269?s=80&v=4"},"commit":{"message":"Merge pull request #157 from CCBR/tools-version\n\nchore: specify ccbr_tools version v0.1.0","shortMessageHtmlLink":"Merge pull request <a class=\"issue-link js-issue-link\" data-error-text=\"Failed to load title\" data-id=\"2489916691\" data-permission-text=\"Title is private\" data-url=\"https://github.com/CCBR/RENEE/issues/157\" data-hovercard-type=\"pull_request\" data-hovercard-url=\"/CCBR/RENEE/pull/157/hovercard\" href=\"https://github.com/CCBR/RENEE/pull/157\">#157</a> from CCBR/tools-version"}},{"before":null,"after":"ad02248f08ca0d2dc07ef8cb1e806e647ddb39e4","ref":"refs/heads/tools-version","pushedAt":"2024-08-27T16:58:40.000Z","pushType":"branch_creation","commitsCount":0,"pusher":{"login":"kelly-sovacool","name":"Kelly Sovacool, PhD","path":"/kelly-sovacool","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/17768269?s=80&v=4"},"commit":{"message":"chore: specify ccbr_tools version v0.1.0","shortMessageHtmlLink":"chore: specify ccbr_tools version v0.1.0"}},{"before":"b67417e1d563057d543783ce8ce90b737fda463b","after":null,"ref":"refs/heads/use-tools-pkg","pushedAt":"2024-08-26T16:25:38.000Z","pushType":"branch_deletion","commitsCount":0,"pusher":{"login":"samarth8392","name":"Samarth Mathur","path":"/samarth8392","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/22455222?s=80&v=4"}},{"before":"181a4bf723ea1e6a864e7ea926d451d36c3f6dd0","after":"5b9daeb85a0c0998c9cd81502b724b79bb2c1e5e","ref":"refs/heads/main","pushedAt":"2024-08-26T16:25:36.000Z","pushType":"pr_merge","commitsCount":15,"pusher":{"login":"samarth8392","name":"Samarth Mathur","path":"/samarth8392","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/22455222?s=80&v=4"},"commit":{"message":"Merge pull request #151 from CCBR/use-tools-pkg\n\nUse tools package","shortMessageHtmlLink":"Merge pull request <a class=\"issue-link js-issue-link\" data-error-text=\"Failed to load title\" data-id=\"2464022304\" data-permission-text=\"Title is private\" data-url=\"https://github.com/CCBR/RENEE/issues/151\" data-hovercard-type=\"pull_request\" data-hovercard-url=\"/CCBR/RENEE/pull/151/hovercard\" href=\"https://github.com/CCBR/RENEE/pull/151\">#151</a> from CCBR/use-tools-pkg"}},{"before":"6dadb0aa9c9f66852ef47e06d569f619d65979f2","after":"b67417e1d563057d543783ce8ce90b737fda463b","ref":"refs/heads/use-tools-pkg","pushedAt":"2024-08-26T16:22:34.000Z","pushType":"push","commitsCount":9,"pusher":{"login":"samarth8392","name":"Samarth Mathur","path":"/samarth8392","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/22455222?s=80&v=4"},"commit":{"message":"Merge branch 'main' into use-tools-pkg","shortMessageHtmlLink":"Merge branch 'main' into use-tools-pkg"}},{"before":"344ed249ecea718df446618ab73a32ca96cde746","after":"1cbe90055d16930e0d263eb47399a89599a95b99","ref":"refs/heads/gh-pages","pushedAt":"2024-08-26T15:58:54.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"github-actions[bot]","name":null,"path":"/apps/github-actions","primaryAvatarUrl":"https://avatars.githubusercontent.com/in/15368?s=80&v=4"},"commit":{"message":"Deployed 181a4bf to dev with MkDocs 1.6.0 and mike 2.1.3","shortMessageHtmlLink":"Deployed <a class=\"commit-link\" data-hovercard-type=\"commit\" data-hovercard-url=\"https://github.com/CCBR/RENEE/commit/181a4bf723ea1e6a864e7ea926d451d36c3f6dd0/hovercard\" href=\"https://github.com/CCBR/RENEE/commit/181a4bf723ea1e6a864e7ea926d451d36c3f6dd0\"><tt>181a4bf</tt></a> to dev with MkDocs 1.6.0 and mike 2.1.3"}},{"before":"58259dc15060b1a20ca89d16d72934966538b875","after":null,"ref":"refs/heads/doc-faqs","pushedAt":"2024-08-26T15:50:13.000Z","pushType":"branch_deletion","commitsCount":0,"pusher":{"login":"samarth8392","name":"Samarth Mathur","path":"/samarth8392","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/22455222?s=80&v=4"}},{"before":"e75722b854f69c52244ec9cce3f4770d7aac92e9","after":"181a4bf723ea1e6a864e7ea926d451d36c3f6dd0","ref":"refs/heads/main","pushedAt":"2024-08-26T15:50:12.000Z","pushType":"pr_merge","commitsCount":8,"pusher":{"login":"samarth8392","name":"Samarth Mathur","path":"/samarth8392","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/22455222?s=80&v=4"},"commit":{"message":"Merge pull request #156 from CCBR/doc-faqs\n\nUpdate doc website with more FAQs and expect output tab","shortMessageHtmlLink":"Merge pull request <a class=\"issue-link js-issue-link\" data-error-text=\"Failed to load title\" data-id=\"2481768648\" data-permission-text=\"Title is private\" data-url=\"https://github.com/CCBR/RENEE/issues/156\" data-hovercard-type=\"pull_request\" data-hovercard-url=\"/CCBR/RENEE/pull/156/hovercard\" href=\"https://github.com/CCBR/RENEE/pull/156\">#156</a> from CCBR/doc-faqs"}},{"before":"9b9d6993da06507b34e1a196507274d69771392d","after":"58259dc15060b1a20ca89d16d72934966538b875","ref":"refs/heads/doc-faqs","pushedAt":"2024-08-26T15:20:15.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"kelly-sovacool","name":"Kelly Sovacool, PhD","path":"/kelly-sovacool","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/17768269?s=80&v=4"},"commit":{"message":"chore: update changelog entry with PR number","shortMessageHtmlLink":"chore: update changelog entry with PR number"}},{"before":"d33c0563028416ad6a56a3d6ef1fcada80a83b5f","after":"9b9d6993da06507b34e1a196507274d69771392d","ref":"refs/heads/doc-faqs","pushedAt":"2024-08-26T14:17:22.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"samarth8392","name":"Samarth Mathur","path":"/samarth8392","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/22455222?s=80&v=4"},"commit":{"message":"fix: script links in troubleshooting.md doc","shortMessageHtmlLink":"fix: script links in troubleshooting.md doc"}},{"before":"93092baafe9d2a42a99e9127b8121401fc6a94dc","after":"6dadb0aa9c9f66852ef47e06d569f619d65979f2","ref":"refs/heads/use-tools-pkg","pushedAt":"2024-08-26T14:10:45.000Z","pushType":"push","commitsCount":13,"pusher":{"login":"samarth8392","name":"Samarth Mathur","path":"/samarth8392","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/22455222?s=80&v=4"},"commit":{"message":"Merge branch 'main' into use-tools-pkg","shortMessageHtmlLink":"Merge branch 'main' into use-tools-pkg"}},{"before":"501647473d5d6be5e3aed50c6a931180f174f058","after":"a7d6ebcca973b5a7de07aab6cd14ed16266b2120","ref":"refs/heads/iss-129","pushedAt":"2024-08-26T13:58:19.000Z","pushType":"push","commitsCount":13,"pusher":{"login":"kelly-sovacool","name":"Kelly Sovacool, PhD","path":"/kelly-sovacool","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/17768269?s=80&v=4"},"commit":{"message":"Merge branch 'main' into iss-129","shortMessageHtmlLink":"Merge branch 'main' into iss-129"}},{"before":"feaa966eef2b00a0b8fffc419e0e7804f40ae06b","after":"827ca7677a570580c38f5e392b9431e2dca8d40d","ref":"refs/heads/rsem-isoform-matrix","pushedAt":"2024-08-23T12:55:51.000Z","pushType":"push","commitsCount":13,"pusher":{"login":"kelly-sovacool","name":"Kelly Sovacool, PhD","path":"/kelly-sovacool","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/17768269?s=80&v=4"},"commit":{"message":"Merge branch 'main' into rsem-isoform-matrix","shortMessageHtmlLink":"Merge branch 'main' into rsem-isoform-matrix"}}],"hasNextPage":true,"hasPreviousPage":false,"activityType":"all","actor":null,"timePeriod":"all","sort":"DESC","perPage":30,"cursor":"Y3Vyc29yOnYyOpK7MjAyNC0wOS0xN1QxOTozMjoxMi4wMDAwMDBazwAAAAS46t0D","startCursor":"Y3Vyc29yOnYyOpK7MjAyNC0wOS0xN1QxOTozMjoxMi4wMDAwMDBazwAAAAS46t0D","endCursor":"Y3Vyc29yOnYyOpK7MjAyNC0wOC0yM1QxMjo1NTo1MS4wMDAwMDBazwAAAASiWY55"}},"title":"Activity · CCBR/RENEE"}