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setup.py
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setup.py
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import os
from setuptools import setup
import sys
if sys.version_info[0] < 3:
raise Exception('markov_clustering requires Python 3')
distmeta = {}
for line in open(os.path.join('markov_clustering', '__init__.py')):
try:
field, value = (x.strip() for x in line.split('='))
except ValueError:
continue
if field == '__version_info__':
value = value.strip('[]()')
value = '.'.join(x.strip(' \'"') for x in value.split(','))
else:
value = value.strip('\'"')
distmeta[field] = value
long_description = "See {}".format(distmeta["__homepage__"])
setup(
name="markov_clustering",
version=distmeta["__version_info__"],
description="Implementation of the Markov clustering (MCL) algorithm in python.",
long_description=long_description,
author=distmeta["__author__"],
author_email=distmeta["__contact__"],
url=distmeta["__homepage__"],
license="MIT",
platforms=["linux"],
packages=["markov_clustering"],
python_requires='~=3.0',
install_requires=[
"numpy",
"scipy",
"scikit-learn",
],
extras_require={
"drawing": ["networkx", "matplotlib"]
},
entry_points={
},
classifiers=[
"Development Status :: 3 - Alpha",
"Intended Audience :: Developers",
"Intended Audience :: Science/Research",
"Operating System :: POSIX :: Linux",
"Programming Language :: Python",
"Topic :: Scientific/Engineering",
"License :: OSI Approved :: MIT License",
],
keywords = "bioinformatics clustering"
)