-
Notifications
You must be signed in to change notification settings - Fork 14
New issue
Have a question about this project? Sign up for a free GitHub account to open an issue and contact its maintainers and the community.
By clicking “Sign up for GitHub”, you agree to our terms of service and privacy statement. We’ll occasionally send you account related emails.
Already on GitHub? Sign in to your account
--output_vcf
parameter doesn't work when including a relative path
#192
Comments
Hi, |
Thank you very much for your reply. Download the bam files again, and run the program again. Apparently the previous problem was solved, but it shows me another error when collecting the results of the vcf Error message:
|
I think the actual error message has been cut, could copy the content of the |
When reviewing the |
Indeed the |
--output_vcf
parameter doesn't work when including a relative path
Thank you very much for everything, excellent program |
Hi, i am trying to run the program using:
The bed file is sorted, the bam files are in the corresponding folder with their respective .bai, and in the reference folder are the .fasta, .fai, .dict, .amb, .ann, .bwt, . pac and .sa.
But I get an error in the execution process. I would appreciate your response, thank you.
Error message:
The text was updated successfully, but these errors were encountered: