Separate Intrachain Go from Interchain Go

[Lp0lp]

Could separate the two go networks, and then let the user decide whether they want intra, inter, or both go networks applied. (Idea by Paulo.)

[sebtha]

This could be a nice feature which might help to get more flexibility between chains and/or domains.

Practically, we could simply rely on the information provided in the CG.pdb file, to get the chains separated, which is available in columns 4 and 8 of the contact map tables.

But in my opinion, it would be much more powerful if one can supply the domains via a flag. Following this idea, similar to the --idp_start and --idp_end options, several residue ranges could be defined. The Go-model would then be separated between these domains and their strengths could be tuned independently.