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Access to necessary data for running Circcode #15

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iichelhadi opened this issue Jun 8, 2021 · 1 comment
Open

Access to necessary data for running Circcode #15

iichelhadi opened this issue Jun 8, 2021 · 1 comment

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@iichelhadi
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hi guys,
it is not clear to me where you have acquired the sequence of ribosomal RNA for human from ensembl.
Similarly, it is not clear to me what you mean by coding and non-coding sequences
Also I was wondering if the tool can be used on RNA seq data from ribosomal RNA depleted RNA seq

regards
@bio-visualisation
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@iichelhadi @PSSUN Is there any information whether it can be used on rRNA depleted RNA-Seq data?

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@iichelhadi @bio-visualisation