-
Notifications
You must be signed in to change notification settings - Fork 1
/
CMakeLists.txt
410 lines (323 loc) · 15.5 KB
/
CMakeLists.txt
1
2
3
4
5
6
7
8
9
10
11
12
13
14
15
16
17
18
19
20
21
22
23
24
25
26
27
28
29
30
31
32
33
34
35
36
37
38
39
40
41
42
43
44
45
46
47
48
49
50
51
52
53
54
55
56
57
58
59
60
61
62
63
64
65
66
67
68
69
70
71
72
73
74
75
76
77
78
79
80
81
82
83
84
85
86
87
88
89
90
91
92
93
94
95
96
97
98
99
100
101
102
103
104
105
106
107
108
109
110
111
112
113
114
115
116
117
118
119
120
121
122
123
124
125
126
127
128
129
130
131
132
133
134
135
136
137
138
139
140
141
142
143
144
145
146
147
148
149
150
151
152
153
154
155
156
157
158
159
160
161
162
163
164
165
166
167
168
169
170
171
172
173
174
175
176
177
178
179
180
181
182
183
184
185
186
187
188
189
190
191
192
193
194
195
196
197
198
199
200
201
202
203
204
205
206
207
208
209
210
211
212
213
214
215
216
217
218
219
220
221
222
223
224
225
226
227
228
229
230
231
232
233
234
235
236
237
238
239
240
241
242
243
244
245
246
247
248
249
250
251
252
253
254
255
256
257
258
259
260
261
262
263
264
265
266
267
268
269
270
271
272
273
274
275
276
277
278
279
280
281
282
283
284
285
286
287
288
289
290
291
292
293
294
295
296
297
298
299
300
301
302
303
304
305
306
307
308
309
310
311
312
313
314
315
316
317
318
319
320
321
322
323
324
325
326
327
328
329
330
331
332
333
334
335
336
337
338
339
340
341
342
343
344
345
346
347
348
349
350
351
352
353
354
355
356
357
358
359
360
361
362
363
364
365
366
367
368
369
370
371
372
373
374
375
376
377
378
379
380
381
382
383
384
385
386
387
388
389
390
391
392
393
394
395
396
397
398
399
400
401
402
403
404
405
406
407
408
409
410
# 3.10 required for modernised FindMPI
cmake_minimum_required(VERSION 3.10)
project(
bookleaf
VERSION 2.0.2
DESCRIPTION "BookLeaf is a 2D unstructured hydrodynamics mini-app."
LANGUAGES C CXX
)
# Check platform
if (${CMAKE_SYSTEM_NAME} MATCHES "Linux")
add_definitions("-DBOOKLEAF_LINUX_BUILD")
elseif (${CMAKE_SYSTEM_NAME} MATCHES "Darwin")
add_definitions("-DBOOKLEAF_DARWIN_BUILD")
endif ()
# Build type defaults to Release
if (NOT DEFINED CMAKE_BUILD_TYPE)
message(STATUS "Defaulting to Release build as build type was not specified")
set(CMAKE_BUILD_TYPE "Release")
endif (NOT DEFINED CMAKE_BUILD_TYPE)
# Locate custom Find*.cmake files
set(CMAKE_MODULE_PATH ${PROJECT_SOURCE_DIR}/cmake)
# Used in custom Find*.cmake files
include(FindPackageHandleStandardArgs)
# Set search paths
string(REPLACE ":" ";" LIBRARY_DIRS "$ENV{LD_LIBRARY_PATH}")
list(APPEND CMAKE_LIBRARY_PATH ${LIBRARY_DIRS})
string(REPLACE ":" ";" INCLUDE_DIRS "$ENV{C_INCLUDE_PATH}")
list(APPEND CMAKE_INCLUDE_PATH ${INCLUDE_DIRS})
string(REPLACE ":" ";" INCLUDE_DIRS "$ENV{CPLUS_INCLUDE_PATH}")
list(APPEND CMAKE_INCLUDE_PATH ${INCLUDE_DIRS})
# Extra features off by default
# ... Typhon (MPI support)
if (NOT DEFINED ENABLE_TYPHON)
set(ENABLE_TYPHON OFF)
endif (NOT DEFINED ENABLE_TYPHON)
# ... Silo (visualisation dumps)
if (NOT DEFINED ENABLE_SILO)
set(ENABLE_SILO OFF)
endif (NOT DEFINED ENABLE_SILO)
# ... ParMETIS (distributed mesh partitioning)
if (NOT DEFINED ENABLE_PARMETIS)
set(ENABLE_PARMETIS OFF)
endif (NOT DEFINED ENABLE_PARMETIS)
# ... Caliper (precise timing information)
if (NOT DEFINED ENABLE_CALIPER)
set(ENABLE_CALIPER OFF)
endif (NOT DEFINED ENABLE_CALIPER)
# Testing related options, off by default
# ... Build the tests?
if (NOT DEFINED BUILD_TESTS)
set(BUILD_TESTS OFF)
endif (NOT DEFINED BUILD_TESTS)
# ... Build bookleaf-diff (equivalent to BUILD_TESTS by default)
if (NOT DEFINED BUILD_BOOKLEAF_DIFF)
set(BUILD_BOOKLEAF_DIFF ${BUILD_TESTS})
endif (NOT DEFINED BUILD_BOOKLEAF_DIFF)
# ... ZLib (used for (de)compressing test dumps), equivalent to BUILD_TESTS by
# ... default
if (NOT DEFINED ENABLE_ZLIB)
set(ENABLE_ZLIB ${BUILD_TESTS})
endif (NOT DEFINED ENABLE_ZLIB)
# ------------------------------------------------------------------------------
# Get VCS information
# ------------------------------------------------------------------------------
# Get the current working branch
execute_process(
COMMAND git rev-parse --abbrev-ref HEAD
WORKING_DIRECTORY ${PROJECT_SOURCE_DIR}
OUTPUT_VARIABLE GIT_BRANCH
OUTPUT_STRIP_TRAILING_WHITESPACE
)
# Get the latest abbreviated commit hash of the working branch
execute_process(
COMMAND git log -1 --format=%h
WORKING_DIRECTORY ${PROJECT_SOURCE_DIR}
OUTPUT_VARIABLE GIT_COMMIT_HASH
OUTPUT_STRIP_TRAILING_WHITESPACE
)
add_definitions("-DBOOKLEAF_GIT_BRANCH=${GIT_BRANCH}")
add_definitions("-DBOOKLEAF_GIT_COMMIT_HASH=${GIT_COMMIT_HASH}")
# ------------------------------------------------------------------------------
# Setup
# ------------------------------------------------------------------------------
# Core BookLeaf source files
set(BOOKLEAF_LIB_SRC
${PROJECT_SOURCE_DIR}/src/common/data.cpp
${PROJECT_SOURCE_DIR}/src/common/data_control.cpp
${PROJECT_SOURCE_DIR}/src/common/error.cpp
${PROJECT_SOURCE_DIR}/src/common/cmd_args.cpp
${PROJECT_SOURCE_DIR}/src/common/config.cpp
${PROJECT_SOURCE_DIR}/src/common/runtime.cpp
${PROJECT_SOURCE_DIR}/src/common/timer_control.cpp
${PROJECT_SOURCE_DIR}/src/packages/time/config.cpp
${PROJECT_SOURCE_DIR}/src/packages/time/driver/set.cpp
${PROJECT_SOURCE_DIR}/src/packages/time/driver/utils.cpp
${PROJECT_SOURCE_DIR}/src/packages/time/driver/advance.cpp
${PROJECT_SOURCE_DIR}/src/packages/hydro/config.cpp
${PROJECT_SOURCE_DIR}/src/packages/hydro/driver/get_acceleration.cpp
${PROJECT_SOURCE_DIR}/src/packages/hydro/driver/get_energy.cpp
${PROJECT_SOURCE_DIR}/src/packages/hydro/driver/get_eos.cpp
${PROJECT_SOURCE_DIR}/src/packages/hydro/driver/get_force.cpp
${PROJECT_SOURCE_DIR}/src/packages/hydro/driver/get_artificial_viscosity.cpp
${PROJECT_SOURCE_DIR}/src/packages/hydro/driver/get_state.cpp
${PROJECT_SOURCE_DIR}/src/packages/hydro/driver/get_dt.cpp
${PROJECT_SOURCE_DIR}/src/packages/hydro/driver/get_cs2.cpp
${PROJECT_SOURCE_DIR}/src/packages/hydro/driver/init.cpp
${PROJECT_SOURCE_DIR}/src/packages/hydro/driver/print.cpp
${PROJECT_SOURCE_DIR}/src/packages/hydro/driver/set.cpp
${PROJECT_SOURCE_DIR}/src/packages/hydro/kernel/get_acceleration.cpp
${PROJECT_SOURCE_DIR}/src/packages/hydro/kernel/get_energy.cpp
${PROJECT_SOURCE_DIR}/src/packages/hydro/kernel/get_force.cpp
${PROJECT_SOURCE_DIR}/src/packages/hydro/kernel/get_artificial_viscosity.cpp
${PROJECT_SOURCE_DIR}/src/packages/hydro/kernel/get_dt.cpp
${PROJECT_SOURCE_DIR}/src/packages/hydro/kernel/init.cpp
${PROJECT_SOURCE_DIR}/src/packages/hydro/kernel/print.cpp
${PROJECT_SOURCE_DIR}/src/packages/ale/config.cpp
${PROJECT_SOURCE_DIR}/src/packages/ale/driver/get_mesh_status.cpp
${PROJECT_SOURCE_DIR}/src/packages/ale/driver/get_flux_volume.cpp
${PROJECT_SOURCE_DIR}/src/packages/ale/driver/advect.cpp
${PROJECT_SOURCE_DIR}/src/packages/ale/driver/hydro_update.cpp
${PROJECT_SOURCE_DIR}/src/packages/ale/driver/utils.cpp
${PROJECT_SOURCE_DIR}/src/packages/ale/driver/get_dt.cpp
${PROJECT_SOURCE_DIR}/src/packages/ale/kernel/get_mesh_velocity.cpp
${PROJECT_SOURCE_DIR}/src/packages/ale/kernel/get_mesh_status.cpp
${PROJECT_SOURCE_DIR}/src/packages/ale/kernel/advectors.cpp
${PROJECT_SOURCE_DIR}/src/packages/ale/kernel/advect.cpp
${PROJECT_SOURCE_DIR}/src/packages/ale/kernel/get_dt.cpp
${PROJECT_SOURCE_DIR}/src/packages/setup/indicators.cpp
${PROJECT_SOURCE_DIR}/src/packages/setup/mesh_region.cpp
${PROJECT_SOURCE_DIR}/src/packages/setup/generate_mesh.cpp
${PROJECT_SOURCE_DIR}/src/packages/setup/renumber_mesh.cpp
${PROJECT_SOURCE_DIR}/src/packages/setup/transfer_mesh.cpp
${PROJECT_SOURCE_DIR}/src/packages/setup/types.cpp
${PROJECT_SOURCE_DIR}/src/packages/setup/config.cpp
${PROJECT_SOURCE_DIR}/src/packages/setup/driver/set_shape_flags.cpp
${PROJECT_SOURCE_DIR}/src/packages/setup/driver/set_thermodynamics.cpp
${PROJECT_SOURCE_DIR}/src/packages/setup/driver/set_kinematics.cpp
${PROJECT_SOURCE_DIR}/src/packages/setup/driver/set_initial_conditions.cpp
${PROJECT_SOURCE_DIR}/src/packages/setup/kernel/set_thermodynamics.cpp
${PROJECT_SOURCE_DIR}/src/packages/setup/kernel/set_kinematics.cpp
${PROJECT_SOURCE_DIR}/src/packages/setup/kernel/set_flags.cpp
${PROJECT_SOURCE_DIR}/src/packages/setup/kernel/shapes.cpp
${PROJECT_SOURCE_DIR}/src/packages/init/kernel.cpp
${PROJECT_SOURCE_DIR}/src/packages/init/driver.cpp
${PROJECT_SOURCE_DIR}/src/packages/io/driver/io_driver.cpp
${PROJECT_SOURCE_DIR}/src/packages/check/driver/validate.cpp
${PROJECT_SOURCE_DIR}/src/packages/check/driver/tests.cpp
${PROJECT_SOURCE_DIR}/src/packages/check/kernel/tests.cpp
${PROJECT_SOURCE_DIR}/src/utilities/comms/config.cpp
${PROJECT_SOURCE_DIR}/src/utilities/misc/boundary_conditions.cpp
${PROJECT_SOURCE_DIR}/src/utilities/misc/average.cpp
${PROJECT_SOURCE_DIR}/src/utilities/eos/config.cpp
${PROJECT_SOURCE_DIR}/src/utilities/eos/get_eos.cpp
${PROJECT_SOURCE_DIR}/src/utilities/geometry/geometry.cpp
${PROJECT_SOURCE_DIR}/src/utilities/mix/driver/list.cpp
${PROJECT_SOURCE_DIR}/src/utilities/mix/kernel/list.cpp
${PROJECT_SOURCE_DIR}/src/utilities/density/get_density.cpp
${PROJECT_SOURCE_DIR}/src/infrastructure/io/input_deck.cpp
${PROJECT_SOURCE_DIR}/src/infrastructure/io/read.cpp
${PROJECT_SOURCE_DIR}/src/infrastructure/io/write.cpp
${PROJECT_SOURCE_DIR}/src/infrastructure/init.cpp
${PROJECT_SOURCE_DIR}/src/infrastructure/kill.cpp
${PROJECT_SOURCE_DIR}/src/infrastructure/solver.cpp
${PROJECT_SOURCE_DIR}/src/infrastructure/solver/get_dt.cpp
${PROJECT_SOURCE_DIR}/src/infrastructure/solver/lagstep.cpp
${PROJECT_SOURCE_DIR}/src/infrastructure/solver/get_acceleration.cpp
${PROJECT_SOURCE_DIR}/src/infrastructure/solver/get_energy.cpp
${PROJECT_SOURCE_DIR}/src/infrastructure/solver/get_force.cpp
${PROJECT_SOURCE_DIR}/src/infrastructure/solver/alestep.cpp
${PROJECT_SOURCE_DIR}/src/infrastructure/solver/ale_update.cpp
${PROJECT_SOURCE_DIR}/src/packages/io/driver/banner.cpp
)
# Build the core code as a static library, which can be linked into the main
# executable and any unit tests.
add_library(libbookleaf STATIC ${BOOKLEAF_LIB_SRC})
set_target_properties(libbookleaf PROPERTIES OUTPUT_NAME bookleaf)
target_compile_features(libbookleaf PUBLIC cxx_std_11)
target_include_directories(libbookleaf PUBLIC include)
# The main bookleaf executable.
add_executable(bookleaf ${PROJECT_SOURCE_DIR}/src/main.cpp)
target_link_libraries(bookleaf PRIVATE libbookleaf)
# ------------------------------------------------------------------------------
# Compilation settings
# ------------------------------------------------------------------------------
# Generate mesh (this can't be disabled at the moment).
add_definitions("-DBOOKLEAF_MESH_GENERATION")
if (CMAKE_CXX_COMPILER_ID MATCHES "GNU")
add_definitions("-DBOOKLEAF_COMPILER_GNU")
target_compile_options(libbookleaf PUBLIC -Wall -Wextra -pedantic)
endif (CMAKE_CXX_COMPILER_ID MATCHES "GNU")
if (CMAKE_CXX_COMPILER_ID MATCHES "Intel")
add_definitions("-DBOOKLEAF_COMPILER_INTEL")
target_compile_options(libbookleaf PUBLIC -Wall -Wextra -pedantic)
# Intel options copied from Fortran version where applicable
target_compile_options(libbookleaf PUBLIC
# CMake flag de-duping causes issues here
# See: https://gitlab.kitware.com/cmake/cmake/issues/15826
-fp-model source # Implies -fp-model precise also
-no-ftz
-mP2OPT_hlo_loop_unroll=false
-shared-intel)
endif (CMAKE_CXX_COMPILER_ID MATCHES "Intel")
if (CMAKE_CXX_COMPILER_ID MATCHES "Clang")
add_definitions("-DBOOKLEAF_COMPILER_CLANG")
target_compile_options(libbookleaf PUBLIC -Wall -Wextra -pedantic)
endif (CMAKE_CXX_COMPILER_ID MATCHES "Clang")
if (CMAKE_CXX_COMPILER_ID MATCHES "PGI")
add_definitions("-DBOOKLEAF_COMPILER_PGI")
endif (CMAKE_CXX_COMPILER_ID MATCHES "PGI")
# Build type dependent options/definitions
if (CMAKE_BUILD_TYPE MATCHES "Debug")
message(STATUS "Debug build")
add_definitions("-DBOOKLEAF_DEBUG")
if (CMAKE_CXX_COMPILER_ID MATCHES "Intel")
target_compile_options(libbookleaf PUBLIC -traceback)
endif ()
else ()
if (CMAKE_CXX_COMPILER_ID MATCHES "GNU")
target_compile_options(libbookleaf PUBLIC -ftree-vectorize)
elseif (CMAKE_CXX_COMPILER_ID MATCHES "Intel")
target_compile_options(libbookleaf PUBLIC -xHost)
endif ()
endif ()
# ------------------------------------------------------------------------------
# Find dependencies
# ------------------------------------------------------------------------------
# Locate yaml-cpp
find_package(YamlCpp REQUIRED)
target_include_directories(libbookleaf PUBLIC ${YamlCpp_INCLUDES})
target_link_libraries(libbookleaf PRIVATE ${YamlCpp_LIBRARIES})
# Locate zlib
if (ENABLE_ZLIB)
find_package(ZLIB REQUIRED)
add_definitions("-DBOOKLEAF_ZLIB_SUPPORT")
target_include_directories(libbookleaf PUBLIC ${ZLIB_INCLUDES})
target_link_libraries(libbookleaf PRIVATE ${ZLIB_LIBRARIES})
target_sources(libbookleaf PRIVATE
${PROJECT_SOURCE_DIR}/src/utilities/debug/zlib_compressor.cpp)
endif (ENABLE_ZLIB)
# Locate Typhon
if (ENABLE_TYPHON)
set(MPI_CXX_SKIP_MPICXX "true")
find_package(MPI COMPONENTS CXX REQUIRED)
find_package(Typhon REQUIRED)
# Print some information on the MPI distribution
message(STATUS "MPI_CXX_INCLUDE_DIRS = ${MPI_CXX_INCLUDE_DIRS}")
message(STATUS "MPI_CXX_LIBRARIES = ${MPI_CXX_LIBRARIES}")
target_include_directories(libbookleaf PUBLIC ${MPI_CXX_INCLUDE_DIRS})
target_link_libraries(libbookleaf PUBLIC ${MPI_CXX_LIBRARIES})
if (MPI_CXX_COMPILE_OPTIONS)
message(STATUS "MPI_CXX_COMPILE_OPTIONS = ${MPI_CXX_COMPILE_OPTIONS}")
target_compile_options(libbookleaf PUBLIC "${MPI_CXX_COMPILE_OPTIONS}")
endif (MPI_CXX_COMPILE_OPTIONS)
if (MPI_CXX_LINK_FLAGS)
message(STATUS "MPI_CXX_LINK_FLAGS = ${MPI_CXX_LINK_FLAGS}")
set_target_properties(libbookleaf
PROPERTIES LINK_FLAGS "${MPI_CXX_LINK_FLAGS}")
endif (MPI_CXX_LINK_FLAGS)
add_definitions("-DBOOKLEAF_MPI_SUPPORT")
add_definitions("-DBOOKLEAF_MPI_DT_CONTEXT")
target_include_directories(libbookleaf PUBLIC ${Typhon_INCLUDES})
target_link_libraries(libbookleaf PUBLIC ${Typhon_LIBRARIES})
# Extra files needed for splitting the mesh between processors
target_sources(libbookleaf PRIVATE
${PROJECT_SOURCE_DIR}/src/packages/setup/partition_mesh.cpp
${PROJECT_SOURCE_DIR}/src/packages/setup/distribute_mesh.cpp
${PROJECT_SOURCE_DIR}/src/utilities/comms/partition.cpp
${PROJECT_SOURCE_DIR}/src/utilities/comms/exchange.cpp
${PROJECT_SOURCE_DIR}/src/utilities/comms/dt_reduce.cpp)
# Locate ParMETIS (pointless without Typhon)
if (ENABLE_PARMETIS)
find_package(METIS REQUIRED)
find_package(ParMETIS REQUIRED)
add_definitions("-DBOOKLEAF_PARMETIS_SUPPORT")
target_include_directories(libbookleaf PUBLIC ${ParMETIS_INCLUDES})
target_link_libraries(libbookleaf PRIVATE ${ParMETIS_LIBRARIES})
target_include_directories(libbookleaf PUBLIC ${METIS_INCLUDES})
target_link_libraries(libbookleaf PRIVATE ${METIS_LIBRARIES})
endif (ENABLE_PARMETIS)
endif (ENABLE_TYPHON)
# Locate Silo
if (ENABLE_SILO)
find_package(Silo REQUIRED)
find_package(HDF5 REQUIRED)
add_definitions("-DBOOKLEAF_SILO_SUPPORT")
target_sources(libbookleaf PRIVATE
${PROJECT_SOURCE_DIR}/src/packages/io/driver/silo_io_driver.cpp)
target_include_directories(libbookleaf PUBLIC ${Silo_INCLUDES})
target_link_libraries(libbookleaf PRIVATE ${Silo_LIBRARIES})
target_include_directories(libbookleaf PUBLIC ${HDF5_INCLUDES})
target_link_libraries(libbookleaf PRIVATE ${HDF5_LIBRARIES})
endif (ENABLE_SILO)
# Locate Caliper
if (ENABLE_CALIPER)
find_package(Caliper REQUIRED)
add_definitions("-DBOOKLEAF_CALIPER_SUPPORT")
target_include_directories(libbookleaf PUBLIC ${Caliper_INCLUDES})
target_link_libraries(libbookleaf PUBLIC ${CaliperCore_LIBRARIES})
target_link_libraries(libbookleaf PUBLIC ${CaliperMPI_LIBRARIES})
endif (ENABLE_CALIPER)
# ------------------------------------------------------------------------------
# Tools
# ------------------------------------------------------------------------------
add_subdirectory(tools)
# ------------------------------------------------------------------------------
# Installation
# ------------------------------------------------------------------------------
include(GNUInstallDirs)
# Just install the executable, as the library is statically linked and not
# useful on its own.
install(
TARGETS bookleaf
RUNTIME DESTINATION ${CMAKE_INSTALL_BINDIR}
)
# ------------------------------------------------------------------------------
# Testing (requires zlib for decompressing dumps)
# ------------------------------------------------------------------------------
if (BUILD_TESTS AND ENABLE_ZLIB)
enable_testing()
add_subdirectory(test)
elseif (BUILD_TESTS AND NOT ENABLE_ZLIB)
message(WARNING "Not building tests as ZLib was disabled")
endif ()