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feature request: threshold "identical isoform" by a percent overlap of the individual exons #54

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cmatKhan opened this issue Sep 1, 2023 · 0 comments

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cmatKhan commented Sep 1, 2023

For two isoforms to be compared at the sequence level, they should overlap at the exonic level by a certain percent (eg, each exon should be 90% overlapping)

If they are missing an entire exon or something like that, I suggest that is better reported as a splice variant. We aren't calling variants -- we're finding (significant) differences

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