diff --git a/src/main/java/proteomics/Validation/CalFDR.java b/src/main/java/proteomics/Validation/CalFDR.java index 071f7c9..ff4dc25 100644 --- a/src/main/java/proteomics/Validation/CalFDR.java +++ b/src/main/java/proteomics/Validation/CalFDR.java @@ -96,7 +96,7 @@ public static Map calFDR(String sqlPath, boolean cal_evalue, Stri fdr = 0; } else if (fuse_count < decoy_count) { printWarning = true; - fdr = 0; + fdr = (double) (fuse_count + decoy_count) / (double) target_count; } else { fdr = (double) (fuse_count - decoy_count) / (double) target_count; }