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Aggregate new samples to previous analysis #89
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Hi @geocarvalho, When you add a new sample the following steps happen if
Since adding new sample updates the spliceSites, We have to recount the non_split_reads for all samples. Best, Ata |
Hi @AtaJadidAhari, I have a question about whether I need to keep the BAM files for all the samples when I need to rerun the analysis with a new sample. In the documentation, there is a topic titled "Creating a FraserDataSet from existing count matrices", but I'm unsure how to create the |
Hi @geocarvalho , |
Thanks, @AtaJadidAhari. That is a lot of space in my case. |
Hi, thanks for making FRASER open-source.
I ran FRASER on 250 samples and want to add new samples to the analysis.
How do you guys recommend running a new BAM file and aggregating the counts to the previous counts from the first project?
Sorry to ask in the issues session, but I couldn't find any e-mail for that.
Thank you!
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