RNA_ID RNA_BAM_FILE DNA_VCF_FILE DNA_ID DROP_GROUP PAIRED_END COUNT_MODE COUNT_OVERLAPS STRAND HPO_TERMS GENE_COUNTS_FILE GENE_ANNOTATION GENOME SPLICE_COUNTS_DIR FRAS220206776 $HOME/RNA-seq/rawdata/FRAS220206776.Aligned.out.sort.bam fraser TRUE IntersectionStrict TRUE no ucsc FRAS220206777 $HOME/RNA-seq/rawdata/FRAS220206777.Aligned.out.sort.bam fraser TRUE IntersectionStrict TRUE no ucsc FRAS220206778 $HOME/RNA-seq/rawdata/FRAS220206778.Aligned.out.sort.bam fraser TRUE IntersectionStrict TRUE no ucsc FRAS220244965 $HOME/RNA-seq/rawdata/FRAS220244965.Aligned.out.sort.bam fraser TRUE IntersectionStrict TRUE no ucsc FRAS220244966 $HOME/RNA-seq/rawdata/FRAS220244966.Aligned.out.sort.bam fraser TRUE IntersectionStrict TRUE no ucsc FRAS220244967 $HOME/RNA-seq/rawdata/FRAS220244967.Aligned.out.sort.bam fraser TRUE IntersectionStrict TRUE no ucsc FRAS220272013 $HOME/RNA-seq/rawdata/FRAS220272013-1r.Aligned.out.sort.bam fraser TRUE IntersectionStrict TRUE no ucsc FRAS220272014 $HOME/RNA-seq/rawdata/FRAS220272014-1r.Aligned.out.sort.bam fraser TRUE IntersectionStrict TRUE no ucsc FRAS220272015 $HOME/RNA-seq/rawdata/FRAS220272015-1r.Aligned.out.sort.bam fraser TRUE IntersectionStrict TRUE no ucsc liuyihan1 $HOME/RNA-seq/rawdata/liuyihan1.Aligned.out.sort.bam fraser TRUE IntersectionStrict TRUE no ucsc liuyihan2 $HOME/RNA-seq/rawdata/liuyihan2.Aligned.out.sort.bam fraser TRUE IntersectionStrict TRUE no ucsc SRR1069024 fraser TRUE IntersectionStrict TRUE no $HOME/database/RNA_dia/Whole_Blood--hg19--gencode29/geneCounts.tsv.gz $HOME/database/RNA_dia/Whole_Blood--hg19--gencode29 SRR1070813 fraser TRUE IntersectionStrict TRUE no $HOME/database/RNA_dia/Whole_Blood--hg19--gencode29/geneCounts.tsv.gz $HOME/database/RNA_dia/Whole_Blood--hg19--gencode29 SRR1071931 fraser TRUE IntersectionStrict TRUE no $HOME/database/RNA_dia/Whole_Blood--hg19--gencode29/geneCounts.tsv.gz $HOME/database/RNA_dia/Whole_Blood--hg19--gencode29 SRR1072345 fraser TRUE IntersectionStrict TRUE no $HOME/database/RNA_dia/Whole_Blood--hg19--gencode29/geneCounts.tsv.gz $HOME/database/RNA_dia/Whole_Blood--hg19--gencode29 SRR1072529 fraser TRUE IntersectionStrict TRUE no $HOME/database/RNA_dia/Whole_Blood--hg19--gencode29/geneCounts.tsv.gz $HOME/database/RNA_dia/Whole_Blood--hg19--gencode29 SRR1072871 fraser TRUE IntersectionStrict TRUE no $HOME/database/RNA_dia/Whole_Blood--hg19--gencode29/geneCounts.tsv.gz $HOME/database/RNA_dia/Whole_Blood--hg19--gencode29 SRR1073679 fraser TRUE IntersectionStrict TRUE no $HOME/database/RNA_dia/Whole_Blood--hg19--gencode29/geneCounts.tsv.gz $HOME/database/RNA_dia/Whole_Blood--hg19--gencode29 SRR1074646 fraser TRUE IntersectionStrict TRUE no $HOME/database/RNA_dia/Whole_Blood--hg19--gencode29/geneCounts.tsv.gz $HOME/database/RNA_dia/Whole_Blood--hg19--gencode29 SRR1076847 fraser TRUE IntersectionStrict TRUE no $HOME/database/RNA_dia/Whole_Blood--hg19--gencode29/geneCounts.tsv.gz $HOME/database/RNA_dia/Whole_Blood--hg19--gencode29 SRR1077503 fraser TRUE IntersectionStrict TRUE no $HOME/database/RNA_dia/Whole_Blood--hg19--gencode29/geneCounts.tsv.gz $HOME/database/RNA_dia/Whole_Blood--hg19--gencode29 SRR1079259 fraser TRUE IntersectionStrict TRUE no $HOME/database/RNA_dia/Whole_Blood--hg19--gencode29/geneCounts.tsv.gz $HOME/database/RNA_dia/Whole_Blood--hg19--gencode29 SRR1079660 fraser TRUE IntersectionStrict TRUE no $HOME/database/RNA_dia/Whole_Blood--hg19--gencode29/geneCounts.tsv.gz $HOME/database/RNA_dia/Whole_Blood--hg19--gencode29 SRR1080998 fraser TRUE IntersectionStrict TRUE no $HOME/database/RNA_dia/Whole_Blood--hg19--gencode29/geneCounts.tsv.gz $HOME/database/RNA_dia/Whole_Blood--hg19--gencode29 SRR1081712 fraser TRUE IntersectionStrict TRUE no $HOME/database/RNA_dia/Whole_Blood--hg19--gencode29/geneCounts.tsv.gz $HOME/database/RNA_dia/Whole_Blood--hg19--gencode29 SRR1083432 fraser TRUE IntersectionStrict TRUE no $HOME/database/RNA_dia/Whole_Blood--hg19--gencode29/geneCounts.tsv.gz $HOME/database/RNA_dia/Whole_Blood--hg19--gencode29 SRR1083657 fraser TRUE IntersectionStrict TRUE no $HOME/database/RNA_dia/Whole_Blood--hg19--gencode29/geneCounts.tsv.gz $HOME/database/RNA_dia/Whole_Blood--hg19--gencode29 SRR1084577 fraser TRUE IntersectionStrict TRUE no $HOME/database/RNA_dia/Whole_Blood--hg19--gencode29/geneCounts.tsv.gz $HOME/database/RNA_dia/Whole_Blood--hg19--gencode29 SRR1084720 fraser TRUE IntersectionStrict TRUE no $HOME/database/RNA_dia/Whole_Blood--hg19--gencode29/geneCounts.tsv.gz $HOME/database/RNA_dia/Whole_Blood--hg19--gencode29 SRR1087654 fraser TRUE IntersectionStrict TRUE no $HOME/database/RNA_dia/Whole_Blood--hg19--gencode29/geneCounts.tsv.gz $HOME/database/RNA_dia/Whole_Blood--hg19--gencode29