Bugfixes

• using pipeline without count matrix input (issue #114)

• refactored config for submodules, included tests for file getters of AS and MAE

• fixed gatk create dict issue #105

• removed GATK error messages for demo dataset

• adapted AS pipeline for new FRASER version

Major update

• removed snakemake submodules
• better config management
• import gene expression counts possible
• using more robust wBuild (guaranteed dependency graphs and readme html)
• added pytest framework

0.9.2

Fix version for wbuild (#108)

Co-authored-by: mumichae <mi.mueller@tum.de>

0.9.1: remove submodule structure (#101)

* test full end2end pipeline
* removed git submodule structure
* version bump

Co-authored-by: Michaela Müller <mi.mueller@tum.de>

0.9.0

Initialize the first pre-release