Skip to content
New issue

Have a question about this project? Sign up for a free GitHub account to open an issue and contact its maintainers and the community.

By clicking “Sign up for GitHub”, you agree to our terms of service and privacy statement. We’ll occasionally send you account related emails.

Already on GitHub? Sign in to your account

Memory Error: #1

Open
kroscek opened this issue Feb 15, 2018 · 1 comment
Open

Memory Error: #1

kroscek opened this issue Feb 15, 2018 · 1 comment

Comments

@kroscek
Copy link

kroscek commented Feb 15, 2018

Hi.
I have 64GB RAM UBUNTU

Not sure but when I'm trying to fit per column basis, I get an error:
tmp=X[:,i].reshape(1,-1)-X[:,i].reshape(-1,1)
MemoryError

My dataset shape is: (187630,14) numerical values
The error refers to the code in :

tmp=X[:,i].reshape(1,-1)-X[:,i].reshape(-1,1)

@maka89
Copy link
Owner

maka89 commented May 20, 2018

Thats a pretty big dataset to use the standard DKL...
GP methods create a kernel matrix size (nxn). Typically no more than a couple thousand datapoints are used unless the big data approximations from for instance Wilsons paper are used.

Sign up for free to join this conversation on GitHub. Already have an account? Sign in to comment
Labels
None yet
Projects
None yet
Development

No branches or pull requests

2 participants