From b8cda19e130086b5a07185955e147103420291d1 Mon Sep 17 00:00:00 2001 From: kushalkolar Date: Sat, 4 Nov 2023 03:54:10 -0400 Subject: [PATCH] more to demo nb --- notebooks/mcorr_cnmf.ipynb | 22 +++++++++++++++++++--- 1 file changed, 19 insertions(+), 3 deletions(-) diff --git a/notebooks/mcorr_cnmf.ipynb b/notebooks/mcorr_cnmf.ipynb index 9a4228e..2b9c077 100644 --- a/notebooks/mcorr_cnmf.ipynb +++ b/notebooks/mcorr_cnmf.ipynb @@ -1772,6 +1772,8 @@ "Public attributes:\n", "\n", "- `image_widget`: the `ImageWidget` in the visualization\n", + "- `plot_temporal`: the `Plot` with the temporal\n", + "- `plot_heatmap`: the `Plot` with the heatmap\n", "- `cnmf_obj`: The cnmf object currently being visualized. This object gets saved to disk when you click the \"Save Eval to disk\" button.\n", "- `component_index`: current component index, `int`\n", "\n", @@ -1791,10 +1793,14 @@ ] }, { - "cell_type": "markdown", - "id": "3db5a18d-c341-43b2-90d3-b364d25237f0", + "cell_type": "code", + "execution_count": null, + "id": "778a211b-a4a3-4b36-b441-32c9b367a5ce", "metadata": {}, - "source": [] + "outputs": [], + "source": [ + "viz_cnmf.plot_heatmap" + ] }, { "cell_type": "code", @@ -1802,6 +1808,16 @@ "id": "e53a507c-a274-4b41-be16-99530de5006d", "metadata": {}, "outputs": [], + "source": [ + "viz_cnmf.plot_heatmap[\"heatmap\"].cmap = \"viridis\"" + ] + }, + { + "cell_type": "code", + "execution_count": null, + "id": "6260eba2-8c40-478e-ad90-f355d3861c8f", + "metadata": {}, + "outputs": [], "source": [] } ],