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For the sake of debugging failed CELLRANGER_COUNT processes, it would be helpful if cellranger_count.py removed any existing output directory so that .command.run can be run multiple times without having to delete the output directory in between each run (otherwise, you get the error RuntimeError: pipestance 'OUTPUT_DIRECTORY' already exists).
The text was updated successfully, but these errors were encountered:
Description of feature
For the sake of debugging failed
CELLRANGER_COUNT
processes, it would be helpful ifcellranger_count.py
removed any existing output directory so that.command.run
can be run multiple times without having to delete the output directory in between each run (otherwise, you get the errorRuntimeError: pipestance 'OUTPUT_DIRECTORY' already exists
).The text was updated successfully, but these errors were encountered: