{"payload":{"pageCount":1,"repositories":[{"type":"Public","name":"Rabuffo_et_al_Micro-C_data_analysis","owner":"Siegel-Lab","isFork":false,"description":"This repository contains the scripts used for the Micro-C data analysis performed in Rabuffo et al.","allTopics":[],"primaryLanguage":{"name":"Python","color":"#3572A5"},"pullRequestCount":0,"issueCount":0,"starsCount":1,"forksCount":0,"license":"MIT License","participation":null,"lastUpdated":{"hasBeenPushedTo":true,"timestamp":"2024-07-01T13:16:59.982Z"}},{"type":"Public","name":"Rabuffo_et_al_Tb427v12_assembly_pipeline","owner":"Siegel-Lab","isFork":false,"description":"Closing gaps in the T. brucei Lister 427 genome assembly using ONT reads","allTopics":[],"primaryLanguage":{"name":"Jupyter Notebook","color":"#DA5B0B"},"pullRequestCount":0,"issueCount":0,"starsCount":1,"forksCount":0,"license":"MIT License","participation":null,"lastUpdated":{"hasBeenPushedTo":true,"timestamp":"2024-07-01T12:40:02.198Z"}},{"type":"Public","name":"BioSmoother","owner":"Siegel-Lab","isFork":false,"description":"On-the-fly processing and visualization of interactome data","allTopics":["bioinformatics","data-visualization","hi-c","interactome-sequencing","radicl-seq","grid-seq"],"primaryLanguage":{"name":"Python","color":"#3572A5"},"pullRequestCount":0,"issueCount":0,"starsCount":4,"forksCount":0,"license":"MIT License","participation":null,"lastUpdated":{"hasBeenPushedTo":true,"timestamp":"2024-05-08T09:36:59.499Z"}},{"type":"Public","name":"libBioSmoother","owner":"Siegel-Lab","isFork":false,"description":"On-the-fly processing and visualization of interactome data.","allTopics":["bioinformatics","data-visualization","contact-matrix","hi-c","interactome-sequencing","radicl-seq","grid-seq"],"primaryLanguage":{"name":"C++","color":"#f34b7d"},"pullRequestCount":0,"issueCount":0,"starsCount":0,"forksCount":1,"license":"MIT License","participation":null,"lastUpdated":{"hasBeenPushedTo":true,"timestamp":"2024-05-08T09:11:10.615Z"}},{"type":"Public","name":"libSps","owner":"Siegel-Lab","isFork":false,"description":"O(1) region count queries using sparse prefix sums","allTopics":["sparse","prefix-sum","datastructure"],"primaryLanguage":{"name":"C++","color":"#f34b7d"},"pullRequestCount":0,"issueCount":0,"starsCount":0,"forksCount":0,"license":"MIT License","participation":null,"lastUpdated":{"hasBeenPushedTo":true,"timestamp":"2024-05-08T08:56:35.073Z"}},{"type":"Public","name":"smoother_hg","owner":"Siegel-Lab","isFork":false,"description":"Integration of hg and Smoother.","allTopics":[],"primaryLanguage":{"name":"Python","color":"#3572A5"},"pullRequestCount":0,"issueCount":0,"starsCount":0,"forksCount":0,"license":"MIT License","participation":null,"lastUpdated":{"hasBeenPushedTo":true,"timestamp":"2023-07-06T14:08:18.544Z"}}],"repositoryCount":6,"userInfo":null,"searchable":true,"definitions":[],"typeFilters":[{"id":"all","text":"All"},{"id":"public","text":"Public"},{"id":"source","text":"Sources"},{"id":"fork","text":"Forks"},{"id":"archived","text":"Archived"},{"id":"template","text":"Templates"}],"compactMode":false},"title":"Siegel-Lab repositories"}