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Loss of alignment files when processing multiple samples #9

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umasstr opened this issue Jul 7, 2022 · 0 comments
Open

Loss of alignment files when processing multiple samples #9

umasstr opened this issue Jul 7, 2022 · 0 comments

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@umasstr
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umasstr commented Jul 7, 2022

You may want to consider removing line 74 from circle_finder-pipeline-bwa-mem-samblaster.sh. Users running multiple samples in parallel will have their intermediate sam and bam files removed.
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@umasstr