{"payload":{"feedbackUrl":"https://github.com/orgs/community/discussions/53140","repo":{"id":660282073,"defaultBranch":"main","name":"BERLIN","ownerLogin":"shawlab-moffitt","currentUserCanPush":false,"isFork":false,"isEmpty":false,"createdAt":"2023-06-29T16:40:52.000Z","ownerAvatar":"https://avatars.githubusercontent.com/u/89986836?v=4","public":true,"private":false,"isOrgOwned":false},"refInfo":{"name":"","listCacheKey":"v0:1688056852.0","currentOid":""},"activityList":{"items":[{"before":"001558d1279aeffca8c9fca5d9e794d985da0e61","after":"9ea7d94fcceb2b69c843e89c2981b1cf4c036708","ref":"refs/heads/main","pushedAt":"2024-07-17T13:44:47.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"shawlab-moffitt","name":"Tampa, Moffitt Cancer Center, Shaw Immuno Systems Biology Lab","path":"/shawlab-moffitt","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/89986836?s=80&v=4"},"commit":{"message":"Update pseudobulk2easyapp.r","shortMessageHtmlLink":"Update pseudobulk2easyapp.r"}},{"before":"791ed06985da7bfccaee97dadcb715592c72910e","after":"001558d1279aeffca8c9fca5d9e794d985da0e61","ref":"refs/heads/main","pushedAt":"2024-02-09T03:49:58.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"chingyaousf","name":null,"path":"/chingyaousf","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/96981462?s=80&v=4"},"commit":{"message":"Update README.md","shortMessageHtmlLink":"Update README.md"}},{"before":"7e27ad8faa23c98700faacac3522758b84041a11","after":"791ed06985da7bfccaee97dadcb715592c72910e","ref":"refs/heads/main","pushedAt":"2024-02-05T20:46:30.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"chingyaousf","name":null,"path":"/chingyaousf","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/96981462?s=80&v=4"},"commit":{"message":"Update README.md","shortMessageHtmlLink":"Update README.md"}},{"before":"92a29497360f89fcb29648931987b5c421681145","after":"7e27ad8faa23c98700faacac3522758b84041a11","ref":"refs/heads/main","pushedAt":"2024-02-05T20:13:53.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"chingyaousf","name":null,"path":"/chingyaousf","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/96981462?s=80&v=4"},"commit":{"message":"update","shortMessageHtmlLink":"update"}},{"before":"f65f5a34e077caeab4405b5d209a704559069906","after":"92a29497360f89fcb29648931987b5c421681145","ref":"refs/heads/main","pushedAt":"2024-02-05T20:07:37.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"chingyaousf","name":null,"path":"/chingyaousf","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/96981462?s=80&v=4"},"commit":{"message":"update","shortMessageHtmlLink":"update"}},{"before":"68e9436d27e2aeaea0bc00f42f11549e3ab0bda2","after":"f65f5a34e077caeab4405b5d209a704559069906","ref":"refs/heads/main","pushedAt":"2023-12-29T19:00:45.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"shawlab-moffitt","name":"Tampa, Moffitt Cancer Center, Shaw Immuno Systems Biology Lab","path":"/shawlab-moffitt","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/89986836?s=80&v=4"},"commit":{"message":"Create pseudobulk2easyapp.r","shortMessageHtmlLink":"Create pseudobulk2easyapp.r"}},{"before":"ca3d9eaa02687f7345558826cb3e1a633b73676c","after":"68e9436d27e2aeaea0bc00f42f11549e3ab0bda2","ref":"refs/heads/main","pushedAt":"2023-12-29T19:00:28.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"shawlab-moffitt","name":"Tampa, Moffitt Cancer Center, Shaw Immuno Systems Biology Lab","path":"/shawlab-moffitt","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/89986836?s=80&v=4"},"commit":{"message":"Delete 5 - PseudoBulk Analysisea directory","shortMessageHtmlLink":"Delete 5 - PseudoBulk Analysisea directory"}},{"before":"dfedcf2a4b7c0e4fccabd4d29c486b8e9d6f0362","after":"ca3d9eaa02687f7345558826cb3e1a633b73676c","ref":"refs/heads/main","pushedAt":"2023-12-29T18:59:52.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"shawlab-moffitt","name":"Tampa, Moffitt Cancer Center, Shaw Immuno Systems Biology Lab","path":"/shawlab-moffitt","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/89986836?s=80&v=4"},"commit":{"message":"Create pseudobulk2easyapp_example.r","shortMessageHtmlLink":"Create pseudobulk2easyapp_example.r"}},{"before":"cfbb50e41f54cb73f4edf386115d645dc5889169","after":"dfedcf2a4b7c0e4fccabd4d29c486b8e9d6f0362","ref":"refs/heads/main","pushedAt":"2023-12-29T16:51:04.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"shawlab-moffitt","name":"Tampa, Moffitt Cancer Center, Shaw Immuno Systems Biology Lab","path":"/shawlab-moffitt","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/89986836?s=80&v=4"},"commit":{"message":"Create README.md","shortMessageHtmlLink":"Create README.md"}},{"before":"41acba83702c2a8c4b60563c33f2c6d984c6cb86","after":"cfbb50e41f54cb73f4edf386115d645dc5889169","ref":"refs/heads/main","pushedAt":"2023-11-13T20:05:06.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"chingyaousf","name":null,"path":"/chingyaousf","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/96981462?s=80&v=4"},"commit":{"message":"update","shortMessageHtmlLink":"update"}},{"before":"42cf35e0874580d5b282b004063afd97ea263b3c","after":"41acba83702c2a8c4b60563c33f2c6d984c6cb86","ref":"refs/heads/main","pushedAt":"2023-11-13T19:54:22.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"chingyaousf","name":null,"path":"/chingyaousf","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/96981462?s=80&v=4"},"commit":{"message":"update","shortMessageHtmlLink":"update"}},{"before":"7b6c6e4ac3d07e3cc33dfb5b71664249179ad8a3","after":"42cf35e0874580d5b282b004063afd97ea263b3c","ref":"refs/heads/main","pushedAt":"2023-11-11T05:36:27.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"chingyaousf","name":null,"path":"/chingyaousf","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/96981462?s=80&v=4"},"commit":{"message":"update","shortMessageHtmlLink":"update"}},{"before":"9b1a485fc55116884510dfa16129e95b20283c93","after":"7b6c6e4ac3d07e3cc33dfb5b71664249179ad8a3","ref":"refs/heads/main","pushedAt":"2023-11-11T05:35:00.000Z","pushType":"push","commitsCount":2,"pusher":{"login":"chingyaousf","name":null,"path":"/chingyaousf","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/96981462?s=80&v=4"},"commit":{"message":"Merge branch 'main' of https://github.com/shawlab-moffitt/BERLIN","shortMessageHtmlLink":"Merge branch 'main' of https://github.com/shawlab-moffitt/BERLIN"}},{"before":"0309036bbdc3e92feffde5d3e5845397c401488a","after":"9b1a485fc55116884510dfa16129e95b20283c93","ref":"refs/heads/main","pushedAt":"2023-11-10T21:51:15.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"chingyaousf","name":null,"path":"/chingyaousf","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/96981462?s=80&v=4"},"commit":{"message":"Update 3-Generate_ISCVA_H5.R\n\nif (!dir.exists(output_folder)) {\r\n dir.create(output_folder, recursive = TRUE)\r\n}","shortMessageHtmlLink":"Update 3-Generate_ISCVA_H5.R"}},{"before":"a9f3f44032880c019108e366cbb01fb215c3d8b1","after":"0309036bbdc3e92feffde5d3e5845397c401488a","ref":"refs/heads/main","pushedAt":"2023-11-10T21:39:36.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"chingyaousf","name":null,"path":"/chingyaousf","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/96981462?s=80&v=4"},"commit":{"message":"upload","shortMessageHtmlLink":"upload"}},{"before":"5a890e22d16ae7390abacc289993f8b9d0b25921","after":"a9f3f44032880c019108e366cbb01fb215c3d8b1","ref":"refs/heads/main","pushedAt":"2023-11-07T18:01:33.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"chingyaousf","name":null,"path":"/chingyaousf","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/96981462?s=80&v=4"},"commit":{"message":"upload Docker","shortMessageHtmlLink":"upload Docker"}},{"before":"e840725aba8f51a00dd99282bfec6953d9b7b70b","after":"5a890e22d16ae7390abacc289993f8b9d0b25921","ref":"refs/heads/main","pushedAt":"2023-11-01T16:05:46.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"aobermayer4","name":"Alyssa Obermayer","path":"/aobermayer4","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/59879286?s=80&v=4"},"commit":{"message":"create Docker Folder","shortMessageHtmlLink":"create Docker Folder"}},{"before":"0178a9a4c80f2295c2acecd11be14f9c9e8d07de","after":"e840725aba8f51a00dd99282bfec6953d9b7b70b","ref":"refs/heads/main","pushedAt":"2023-09-14T18:46:23.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"shawlab-moffitt","name":"Tampa, Moffitt Cancer Center, Shaw Immuno Systems Biology Lab","path":"/shawlab-moffitt","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/89986836?s=80&v=4"},"commit":{"message":"Update README.md","shortMessageHtmlLink":"Update README.md"}},{"before":"60c5c9f6dfe50d11994a4e30f4f1f8f3d6410d40","after":"0178a9a4c80f2295c2acecd11be14f9c9e8d07de","ref":"refs/heads/main","pushedAt":"2023-08-21T16:38:58.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"aobermayer4","name":"Alyssa Obermayer","path":"/aobermayer4","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/59879286?s=80&v=4"},"commit":{"message":"move bioc package to bioc installation","shortMessageHtmlLink":"move bioc package to bioc installation"}},{"before":"6f2484d1153635957f2c7a91f8b509b0b6cd3c6a","after":"60c5c9f6dfe50d11994a4e30f4f1f8f3d6410d40","ref":"refs/heads/main","pushedAt":"2023-08-02T18:27:26.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"aobermayer4","name":"Alyssa Obermayer","path":"/aobermayer4","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/59879286?s=80&v=4"},"commit":{"message":"Allow for larger file upload size","shortMessageHtmlLink":"Allow for larger file upload size"}},{"before":"80b815d0343be48befa9e16a0fd043bec67c0537","after":"6f2484d1153635957f2c7a91f8b509b0b6cd3c6a","ref":"refs/heads/main","pushedAt":"2023-07-27T18:46:39.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"aobermayer4","name":"Alyssa Obermayer","path":"/aobermayer4","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/59879286?s=80&v=4"},"commit":{"message":"Update 1-Package_Installation.R","shortMessageHtmlLink":"Update 1-Package_Installation.R"}},{"before":"f31d257395ac69dcc83c406ab7ad2a80c41cab21","after":"80b815d0343be48befa9e16a0fd043bec67c0537","ref":"refs/heads/main","pushedAt":"2023-07-27T15:59:09.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"aobermayer4","name":"Alyssa Obermayer","path":"/aobermayer4","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/59879286?s=80&v=4"},"commit":{"message":"Create README.md","shortMessageHtmlLink":"Create README.md"}},{"before":"643f0b6c0e3ba3d5be1cd79b6408d113643adebe","after":"f31d257395ac69dcc83c406ab7ad2a80c41cab21","ref":"refs/heads/main","pushedAt":"2023-07-27T15:58:33.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"aobermayer4","name":"Alyssa Obermayer","path":"/aobermayer4","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/59879286?s=80&v=4"},"commit":{"message":"Create README.md","shortMessageHtmlLink":"Create README.md"}},{"before":"108c77afa9f63a0e9368850ba7d82be16e924554","after":"643f0b6c0e3ba3d5be1cd79b6408d113643adebe","ref":"refs/heads/main","pushedAt":"2023-07-27T15:57:07.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"aobermayer4","name":"Alyssa Obermayer","path":"/aobermayer4","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/59879286?s=80&v=4"},"commit":{"message":"updated shiny app\n\nUser can now look at pathway score as a color annotation on the UMAP and view a heatmap and dot heatmap","shortMessageHtmlLink":"updated shiny app"}},{"before":"e53e3297c3fef3b31c5382a7f9d9e39df532116c","after":"108c77afa9f63a0e9368850ba7d82be16e924554","ref":"refs/heads/main","pushedAt":"2023-07-14T18:07:32.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"shawlab-moffitt","name":"Tampa, Moffitt Cancer Center, Shaw Immuno Systems Biology Lab","path":"/shawlab-moffitt","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/89986836?s=80&v=4"},"commit":{"message":"Update README.md","shortMessageHtmlLink":"Update README.md"}},{"before":"235da93f8c115f92bf0e3d94238113ab86289882","after":"e53e3297c3fef3b31c5382a7f9d9e39df532116c","ref":"refs/heads/main","pushedAt":"2023-07-14T13:46:18.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"shawlab-moffitt","name":"Tampa, Moffitt Cancer Center, Shaw Immuno Systems Biology Lab","path":"/shawlab-moffitt","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/89986836?s=80&v=4"},"commit":{"message":"Update README.md","shortMessageHtmlLink":"Update README.md"}},{"before":"53f9b5979e17d40ad2d947de18ddbf9c6cab562e","after":"235da93f8c115f92bf0e3d94238113ab86289882","ref":"refs/heads/main","pushedAt":"2023-07-13T15:44:59.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"aobermayer4","name":"Alyssa Obermayer","path":"/aobermayer4","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/59879286?s=80&v=4"},"commit":{"message":"Removed accidental duplication of script","shortMessageHtmlLink":"Removed accidental duplication of script"}},{"before":"3598dcb71048129fbc6867f0d2621b6105e86933","after":"53f9b5979e17d40ad2d947de18ddbf9c6cab562e","ref":"refs/heads/main","pushedAt":"2023-07-13T14:07:40.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"aobermayer4","name":"Alyssa Obermayer","path":"/aobermayer4","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/59879286?s=80&v=4"},"commit":{"message":"added rhdf5 package","shortMessageHtmlLink":"added rhdf5 package"}},{"before":"4535b0bf1d642b848836303d5fa98820193a649b","after":"3598dcb71048129fbc6867f0d2621b6105e86933","ref":"refs/heads/main","pushedAt":"2023-07-12T20:13:24.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"aobermayer4","name":"Alyssa Obermayer","path":"/aobermayer4","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/59879286?s=80&v=4"},"commit":{"message":"removed seurat data package","shortMessageHtmlLink":"removed seurat data package"}},{"before":"8d04317829edf819f9a6a91ebd95dc2cc02f95a4","after":"4535b0bf1d642b848836303d5fa98820193a649b","ref":"refs/heads/main","pushedAt":"2023-07-12T17:26:56.000Z","pushType":"push","commitsCount":2,"pusher":{"login":"aobermayer4","name":"Alyssa Obermayer","path":"/aobermayer4","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/59879286?s=80&v=4"},"commit":{"message":"Merge branch 'main' of https://github.com/shawlab-moffitt/BERLIN","shortMessageHtmlLink":"Merge branch 'main' of https://github.com/shawlab-moffitt/BERLIN"}}],"hasNextPage":true,"hasPreviousPage":false,"activityType":"all","actor":null,"timePeriod":"all","sort":"DESC","perPage":30,"cursor":"Y3Vyc29yOnYyOpK7MjAyNC0wNy0xN1QxMzo0NDo0Ny4wMDAwMDBazwAAAASB5K46","startCursor":"Y3Vyc29yOnYyOpK7MjAyNC0wNy0xN1QxMzo0NDo0Ny4wMDAwMDBazwAAAASB5K46","endCursor":"Y3Vyc29yOnYyOpK7MjAyMy0wNy0xMlQxNzoyNjo1Ni4wMDAwMDBazwAAAANUNIIi"}},"title":"Activity ยท shawlab-moffitt/BERLIN"}