Skip to content

Latest commit

 

History

History
executable file
·
54 lines (43 loc) · 3.61 KB

IO.md

File metadata and controls

executable file
·
54 lines (43 loc) · 3.61 KB
Raw

Data Formats

Libraries for Data/File formats.

  • Arf :: Advanced recording format for physiology and behavior.
  • Feather :: A fast, interoperable binary columnar serialization data frame storage for Python, R, and more powered by Apache Arrow.
  • hdfs :: API and command line interface for HDFS. Documentation
  • lbl :: A python library for reading/writing and manipulating lbl files, represented within python as a numpy record array with fields 'name', 'start', and 'stop'. This format is useful for writing data to the arf file format.
  • loompy :: Python implementation of the Loom file format - http://loompy.org
  • PyCifRW :: Library support for reading and writing CIF (Crystallographic Information Format) files using Python. Source code on Bitucket.
  • PyCIF :: A python module for reading from, writing to, and manipulating International Union of Crystallography (IUCr) CIF-formatted data files.
  • pymarkdown :: Evaluate code in markdown.
  • RDFLib :: A Python library for working with RDF, a simple yet powerful language for representing information. Documentation.
  • sam :: Simple parsing tools in python for SAM-format files.
  • stapler :: A small utility making use of the pypdf library to provide a (somewhat) lighter alternative to pdftk.
  • snakebite :: A pure python HDFS client.
  • xlrd3 :: Port of xlrd for reading excel files to python-3.
  • x_x :: A command line reader that displays either Excel files or CSVs in your terminal.

CSV

  • pyexcel :: Single API for reading, manipulating and writing data in csv, ods, xls, xlsx and xlsm files. Documentation: http://pyexcel.readthedocs.io
  • tabulator-py :: Consistent interface for stream reading and writing tabular data (csv/xls/json/etc).

ELAN-EAF

  • eaf_tools :: Collection of scripts to help in reviewing and preparing ELAN .eaf` files for FAVE alignment
  • pyelan :: A python module that makes interacting with ELAN files easier.

Data Models

Data Type

  • typeshed :: Collection of library stubs for Python, with static types.

Parser

  • numparser :: Python library for parsing numbers from strings. Source Code.
  • Poyo :: A lightweight YAML Parser for Python.

Markdown