A Snakemake workflow for performing differential expression analyses (DEA) on (multimodal) sc/snRNA-seq data powered by the R package Seurat.
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Updated
May 27, 2024 - R
A Snakemake workflow for performing differential expression analyses (DEA) on (multimodal) sc/snRNA-seq data powered by the R package Seurat.
Differential Expression Analysis tool box R lang package for omics data
SPOT - Swift Profiling Of Transcriptomes - a shiny app for gene ranking according to user-defined expression profiles
Here, we describe and provide an RNA-Seq analysis of a RIP assay to understand the mechanism of AML del(9q) progression. (Ali T. Abdallah)
Performing RNA-Seq data analysis and quality control using DESeq2 in R.
Bioinformatics - Differential Expression Analysis
Multi-omics differential expression and integration using PPI networks
Differential gene expression analysis exercise for the course Analytical Methods in Cancer Genomics 2023. The goal is to perform analysis of RNA-Seq data.
Differential gene expression and gene enrichment analyses of B-cell line with ectopic expression of HIV-1 Tat protein
EasyDEA: An Automated Tool for Differential Expression Analysis
R Shiny app for differential-expression analysis using T-test. The app is automatically deployed via GH Actions to shinyapp.io available as https://fuzzylife.shinyapps.io/diffExpr/
Differential gene expression and gene enrichment analyses of B-cell line with ectopic expression of HIV-1 Tat protein
A Snakemake workflow for performing and visualizing differential expression analyses (DEA) on NGS data powered by the R package limma.
Analysis of data from GEO
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