Annotation and Ranking of Structural Variation
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Updated
Jul 1, 2024 - Tcl
Annotation and Ranking of Structural Variation
VIP for AXI Protocol
Lightweight single-html-file-based Genome Segments playground for Visualize genome features cluster(gene arrow map or other features), add synteny among genome fragments or add crosslink among features, add short(PE/MP)/long reads(pacbio or nanopore) mapping or snpindel in vcf(not support complex sv yet), support all CIGAR of sam alignment, dire…
A tool for simulating random mutations in any genome
A simple script to create a customizable html file from an AnnotSV output.
CADD-SV – a framework to score the effect of structural variants
an infrastructure to implement arbitrary indirect registers on top of uvm
An integrated retroduplication caller based on 1) exon-exon junction and 2) discordant reads
"Mastering SystemVerilog: From Fundamentals to Advanced Programming Techniques"
Snakemake pipeline for SV discovery and analysis
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