Update Rcpp dependencies

[dan-knight]

CRAN Message

Compilation fails with R_USE_STRICT_R_HEADERS=true, which defines
STRICT_R_HEADERS to 1 which removes

• the legacy definition of PI (use POSIX's M_PI, available in R fer ever).
• the RS.h declarations for Calloc, Realloc, Free (use R_ forms i
  available since R 3.4.0).

The aim is to clean the namespace: in particular having a definition
for Free has conflicted with some packages' C++ code.

It is planned that STRICT_R_HEADERS=1 will become the default for 4.5.0,
for which it would be good if all CRAN packages, and in particular the
ones with strong reverse dependencies, compile/install ok with the new
default.

Your package is among the ones with strong reverse dependencies which
need updating. We would thus really appreciate if you could provide a
new version of your package as soon as possible which checks ok with
STRICT_R_HEADERS=1.

You can verify that your package checks ok with STRICT_R_HEADERS=1 via R
CMD check --as-cran using a current version of R-devel.

Strict R Check Results

• installing source package ‘BoutrosLab.plotting.general’ ...
  ** package ‘BoutrosLab.plotting.general’ successfully unpacked and MD5 sums checked
  ** using staged installation
  ** libs
  using C compiler: ‘gcc-14 (GCC) 14.2.0’
  make[1]: Entering directory '/data/gannet/ripley/R/packages/tests-Strict/BoutrosLab.plotting.general/src'
  gcc-14 -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG -I/usr/local/include -DSTRICT_R_HEADERS=1 -fpic -g -O2 -Wall -pedantic -mtune=native -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection -Werror=implicit-function-declaration -Wstrict-prototypes -c distance.c -o distance.o
  gcc-14 -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG -I/usr/local/include -DSTRICT_R_HEADERS=1 -fpic -g -O2 -Wall -pedantic -mtune=native -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection -Werror=implicit-function-declaration -Wstrict-prototypes -c init.c -o init.o
  gcc-14 -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG -I/usr/local/include -DSTRICT_R_HEADERS=1 -fpic -g -O2 -Wall -pedantic -mtune=native -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection -Werror=implicit-function-declaration -Wstrict-prototypes -c ks.c -o ks.o
  ks.c: In function 'K':
  ks.c:151:18: error: implicit declaration of function 'Calloc'; did you mean 'calloc'? [-Wimplicit-function-declaration]
  151 | H = (double*) Calloc(m * m, double);
  | ^~~~~~
  | calloc
  ks.c:151:32: error: expected expression before 'double'
  151 | H = (double*) Calloc(m * m, double);
  | ^~~~~~
  ks.c:152:32: error: expected expression before 'double'
  152 | Q = (double*) Calloc(m * m, double);
  | ^~~~~~
  ks.c:180:4: error: implicit declaration of function 'Free'; did you mean 'free'? [-Wimplicit-function-declaration]
  180 | Free(H);
  | ^~~~
  | free
  ks.c: In function 'm_power':
  ks.c:218:33: error: expected expression before 'double'
  218 | B = (double*) Calloc(m * m, double);
  | ^~~~~~
  make[1]: *** [/data/gannet/ripley/R/R-devel/etc/Makeconf:195: ks.o] Error 1
  make[1]: Leaving directory '/data/gannet/ripley/R/packages/tests-Strict/BoutrosLab.plotting.general/src'
  ERROR: compilation failed for package ‘BoutrosLab.plotting.general’
• removing ‘/data/gannet/ripley/R/packages/tests-strict/Libs/BoutrosLab.plotting.general-lib/BoutrosLab.plotting.general’
  Command exited with non-zero status 1
  Time 0:02.89, 1.21 + 0.28