From 51ecac841e00378cbb4c54e31e9c83f98c9c5297 Mon Sep 17 00:00:00 2001 From: Robert Stein Date: Mon, 22 Jan 2024 10:16:03 -0800 Subject: [PATCH 01/10] Bump poetry and urllib --- .github/workflows/continuous_integration.yml | 2 +- poetry.lock | 5650 ------------------ pyproject.toml | 7 +- 3 files changed, 5 insertions(+), 5654 deletions(-) delete mode 100644 poetry.lock diff --git a/.github/workflows/continuous_integration.yml b/.github/workflows/continuous_integration.yml index 48181d49f..3fe66bde3 100644 --- a/.github/workflows/continuous_integration.yml +++ b/.github/workflows/continuous_integration.yml @@ -26,7 +26,7 @@ jobs: # Specify the python versions to test strategy: matrix: - python-version: ["3.10", "3.11"] + python-version: ["3.10", "3.11", "3.12"] # Steps represent a sequence of tasks that will be executed as part of the job steps: diff --git a/poetry.lock b/poetry.lock deleted file mode 100644 index 137fe2c19..000000000 --- a/poetry.lock +++ /dev/null @@ -1,5650 +0,0 @@ -# This file is automatically @generated by Poetry 1.8.3 and should not be changed by hand. - 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"^0.4.7" @@ -40,7 +40,8 @@ sqlalchemy = "^2.0.15" pydantic = "^2.1.1" pylint-pydantic = ">=0.1.6,<0.4.0" astrosurveyutils = "^0.0.1" -urllib3 = ">=1.26.16,<3.0.0" +wintertoo = "^0.4.0" +urllib3 = "^2.0.7" sqlalchemy-utils = "^0.41.1" wintertoo = "^1.5.0" scipy = "^1.12.0" @@ -116,5 +117,5 @@ mirar-docs-autogen = "mirar.utils.docs:iterate_rst_generation" winter-stack = 'mirar.pipelines.winter.run:run_stack_of_stacks' [build-system] -requires = ["setuptools", "wheel", "poetry-core>=1.2.0",] +requires = ["setuptools", "wheel", "poetry-core>=1.8.0",] build-backend = "poetry.core.masonry.api" From d20a9dc50f2703a48a67cc3d3f35b2fb437b3afc Mon Sep 17 00:00:00 2001 From: Robert Stein Date: Mon, 22 Jan 2024 10:36:35 -0800 Subject: [PATCH 02/10] Add wcslin --- .github/workflows/continuous_integration.yml | 2 +- 1 file changed, 1 insertion(+), 1 deletion(-) diff --git a/.github/workflows/continuous_integration.yml b/.github/workflows/continuous_integration.yml index 3fe66bde3..9d18c383c 100644 --- a/.github/workflows/continuous_integration.yml +++ b/.github/workflows/continuous_integration.yml @@ -70,7 +70,7 @@ jobs: - name: install packages with conda shell: bash -el {0} run: | - conda install -c conda-forge astromatic-source-extractor astromatic-scamp astromatic-swarp astromatic-psfex astrometry gsl + conda install -c conda-forge wcslib astromatic-source-extractor astromatic-scamp astromatic-swarp astromatic-psfex astrometry gsl swarp -v scamp -v sex -v From 3a832bcde80b0d77b47bfe3f053c20ef5484dfd9 Mon Sep 17 00:00:00 2001 From: Robert Stein Date: Mon, 22 Jan 2024 10:41:50 -0800 Subject: [PATCH 03/10] deconda poetry --- .github/workflows/continuous_integration.yml | 2 +- 1 file changed, 1 insertion(+), 1 deletion(-) diff --git a/.github/workflows/continuous_integration.yml b/.github/workflows/continuous_integration.yml index 9d18c383c..3fe66bde3 100644 --- a/.github/workflows/continuous_integration.yml +++ b/.github/workflows/continuous_integration.yml @@ -70,7 +70,7 @@ jobs: - name: install packages with conda shell: bash -el {0} run: | - conda install -c conda-forge wcslib astromatic-source-extractor astromatic-scamp astromatic-swarp astromatic-psfex astrometry gsl + conda install -c conda-forge astromatic-source-extractor astromatic-scamp astromatic-swarp astromatic-psfex astrometry gsl swarp -v scamp -v sex -v From a7aff5008b915f117959d46022797ad191739418 Mon Sep 17 00:00:00 2001 From: Robert Stein Date: Tue, 23 Jan 2024 11:35:50 -0800 Subject: [PATCH 04/10] Try apt-get --- .github/workflows/continuous_integration.yml | 10 ++++++---- 1 file changed, 6 insertions(+), 4 deletions(-) diff --git a/.github/workflows/continuous_integration.yml b/.github/workflows/continuous_integration.yml index 3fe66bde3..0358ffc04 100644 --- a/.github/workflows/continuous_integration.yml +++ b/.github/workflows/continuous_integration.yml @@ -67,17 +67,20 @@ jobs: ssh-private-key: | ${{ secrets.WIRC_STARTERPACK_TOKEN }} + - name: install packages with conda shell: bash -el {0} run: | conda install -c conda-forge astromatic-source-extractor astromatic-scamp astromatic-swarp astromatic-psfex astrometry gsl + pip install --upgrade pip + python -m pip install --upgrade poetry coveralls + poetry install + sudo apt-get update + sudo apt-get install libcairo2-dev libnetpbm10-dev netpbm libpng2-dev libjpeg-dev python-numpy python-pyfits python-dev zlib1g-dev libbz2-dev swig cfitsio-dev swarp -v scamp -v sex -v solve-field --version - pip install --upgrade pip - python -m pip install --upgrade poetry coveralls - poetry install # Set up astrometry.net - name: astrometry.net index files @@ -96,7 +99,6 @@ jobs: # Set up database - name: postgres run: | - sudo apt-get update sudo apt-get install postgresql sudo apt-get install postgresql-common sudo apt-get install postgresql-server-dev-14 From b0a8352c83d05805c489a8d1305a49a0bb141792 Mon Sep 17 00:00:00 2001 From: Robert Stein Date: Tue, 23 Jan 2024 11:40:37 -0800 Subject: [PATCH 05/10] wcstools --- .github/workflows/continuous_integration.yml | 5 ++--- 1 file changed, 2 insertions(+), 3 deletions(-) diff --git a/.github/workflows/continuous_integration.yml b/.github/workflows/continuous_integration.yml index 0358ffc04..522e06c76 100644 --- a/.github/workflows/continuous_integration.yml +++ b/.github/workflows/continuous_integration.yml @@ -71,12 +71,10 @@ jobs: - name: install packages with conda shell: bash -el {0} run: | - conda install -c conda-forge astromatic-source-extractor astromatic-scamp astromatic-swarp astromatic-psfex astrometry gsl + conda install -c conda-forge astromatic-source-extractor astromatic-scamp astromatic-swarp astromatic-psfex astrometry gsl wcstools pip install --upgrade pip python -m pip install --upgrade poetry coveralls poetry install - sudo apt-get update - sudo apt-get install libcairo2-dev libnetpbm10-dev netpbm libpng2-dev libjpeg-dev python-numpy python-pyfits python-dev zlib1g-dev libbz2-dev swig cfitsio-dev swarp -v scamp -v sex -v @@ -99,6 +97,7 @@ jobs: # Set up database - name: postgres run: | + sudo apt-get update sudo apt-get install postgresql sudo apt-get install postgresql-common sudo apt-get install postgresql-server-dev-14 From c1408f224e6faf003cb55aa515285f87b97e0ebb Mon Sep 17 00:00:00 2001 From: Robert Stein Date: Tue, 23 Jan 2024 11:46:08 -0800 Subject: [PATCH 06/10] reorder --- .github/workflows/continuous_integration.yml | 6 +++--- 1 file changed, 3 insertions(+), 3 deletions(-) diff --git a/.github/workflows/continuous_integration.yml b/.github/workflows/continuous_integration.yml index 522e06c76..f1811dc43 100644 --- a/.github/workflows/continuous_integration.yml +++ b/.github/workflows/continuous_integration.yml @@ -72,13 +72,13 @@ jobs: shell: bash -el {0} run: | conda install -c conda-forge astromatic-source-extractor astromatic-scamp astromatic-swarp astromatic-psfex astrometry gsl wcstools - pip install --upgrade pip - python -m pip install --upgrade poetry coveralls - poetry install swarp -v scamp -v sex -v solve-field --version + pip install --upgrade pip + python -m pip install --upgrade poetry coveralls + poetry install # Set up astrometry.net - name: astrometry.net index files From 0f296bf2b2b08d2f3214d993b604e2c2357cc3f9 Mon Sep 17 00:00:00 2001 From: Robert Stein Date: Tue, 23 Jan 2024 11:49:51 -0800 Subject: [PATCH 07/10] reorder --- .github/workflows/continuous_integration.yml | 2 +- 1 file changed, 1 insertion(+), 1 deletion(-) diff --git a/.github/workflows/continuous_integration.yml b/.github/workflows/continuous_integration.yml index f1811dc43..743fbe53a 100644 --- a/.github/workflows/continuous_integration.yml +++ b/.github/workflows/continuous_integration.yml @@ -71,7 +71,7 @@ jobs: - name: install packages with conda shell: bash -el {0} run: | - conda install -c conda-forge astromatic-source-extractor astromatic-scamp astromatic-swarp astromatic-psfex astrometry gsl wcstools + conda install -c conda-forge astromatic-source-extractor astromatic-scamp astromatic-swarp astromatic-psfex conda-forge/label/cf202003::astrometry gsl wcstools swarp -v scamp -v sex -v From 8e8b8f86d0272f3f53c8d921cf0ae857782522d7 Mon Sep 17 00:00:00 2001 From: Robert Stein Date: Tue, 23 Jan 2024 11:52:27 -0800 Subject: [PATCH 08/10] Update astrometry.net version --- .github/workflows/continuous_integration.yml | 2 +- 1 file changed, 1 insertion(+), 1 deletion(-) diff --git a/.github/workflows/continuous_integration.yml b/.github/workflows/continuous_integration.yml index 743fbe53a..601d969ae 100644 --- a/.github/workflows/continuous_integration.yml +++ b/.github/workflows/continuous_integration.yml @@ -71,7 +71,7 @@ jobs: - name: install packages with conda shell: bash -el {0} run: | - conda install -c conda-forge astromatic-source-extractor astromatic-scamp astromatic-swarp astromatic-psfex conda-forge/label/cf202003::astrometry gsl wcstools + conda install -c conda-forge astromatic-source-extractor astromatic-scamp astromatic-swarp astromatic-psfex astrometry=0.94 gsl wcstools swarp -v scamp -v sex -v From b803231ac366b3304173ec1662b508974d505704 Mon Sep 17 00:00:00 2001 From: Robert Stein Date: Thu, 1 Aug 2024 09:00:42 -0600 Subject: [PATCH 09/10] Update --- .github/workflows/continuous_integration.yml | 1 - poetry.lock | 5668 ++++++++++++++++++ pyproject.toml | 1 - 3 files changed, 5668 insertions(+), 2 deletions(-) create mode 100644 poetry.lock diff --git a/.github/workflows/continuous_integration.yml b/.github/workflows/continuous_integration.yml index 601d969ae..8a55fe317 100644 --- a/.github/workflows/continuous_integration.yml +++ b/.github/workflows/continuous_integration.yml @@ -67,7 +67,6 @@ jobs: ssh-private-key: | ${{ secrets.WIRC_STARTERPACK_TOKEN }} - - name: install packages with conda shell: bash -el {0} run: | diff --git a/poetry.lock b/poetry.lock new file mode 100644 index 000000000..d48747b1d --- /dev/null +++ b/poetry.lock @@ -0,0 +1,5668 @@ +# This file is automatically @generated by Poetry 1.8.3 and should 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