BI-STEM-Away / sMAP Public

Notifications You must be signed in to change notification settings
Fork 3
Star 2

This is the main repo for prod. version code of R shiny transcriptomics app.

bi-stem-away.github.io/smap/

2 stars 3 forks Branches Tags Activity

Name		Name	Last commit message	Last commit date
Latest commit History 29 Commits
userInterface		userInterface
www		www
LICENSE		LICENSE
README.md		README.md
global.R		global.R
server.R		server.R
ui.R		ui.R

Repository files navigation

sMAP: Standard Microarray Array Pipeline

This repo contains production code of sMAP and maintained by @samuelbharti

Web Links

sMAP Webserver 1: Docker Based
Project Overview: https://bi-stem-away.github.io/sMAP/
Documenation: https://bi-stem-away.github.io/sMAP_doc/
sMAP Tutorial: https://mentorchains.github.io/STEM-AWAY_AWS_BI_2021/sMAP_demo.pdf
STEM-Away: https://stemaway.com/

Developement Details:

R version used: 4.0
Current Deployment: AWS
Docker Image: docker pull samuelbharti/smap

Steps to run at localhost

Install R -version 4.0
Install R Studio
Download the repo and unzip in a folder.
Open Global.R in R studio and Install mentioned packages.
Click on Run
Explore sMAP with Demo Data and Learn from Tutorial given above.