String parsing error for aCompCor in version 0.4.7

[Gab-D-G]

When running aCompCor with the containerized version 0.4.7 we obtain the following string parsing error:

Command:

docker run -it --rm \
-v $PWD/token_dataset:/token_dataset:ro \
-v $PWD/token_rabies_outputs:/token_rabies_outputs/ \
-v $PWD/testing_outputs:/testing_outputs/ \
gabdesgreg/rabies:0.4.7 -p MultiProc --local_threads 6 \
confound_correction /token_rabies_outputs/ /token_rabies_outputs --conf_list mot_6 aCompCor --read_datasink

Error:

  File "/home/rabies/RABIES/rabies/confound_correction_pkg/utils.py", line 192, in select_confound_timecourses
    log.info('Applying aCompCor with '+len(aCompCor_keys)+' components.')
TypeError: can only concatenate str (not "int") to str

The int would need to be explicitely converted to str.

[Gab-D-G]

the container build is not able to re-create the conda environment. We will not correct this issue, and it involves important deviations from the original 0.4.7 to build a new container. Use more recent versions for aCompCor.