Skip to content
@CoBrALab

Computational Brain Anatomy Laboratory

Computational Brain Anatomy Laboratory, located in the CIC at the Douglas Institute, McGill University

Pinned Loading

  1. MAGeTbrain MAGeTbrain Public

    Multiple Automatically Generated Templates brain segmentation algorithm

    Python 48 25

  2. atlases atlases Public

    Segmentations of Neuroanatomy on Hi-Res T1 and T2 MRIs and publicly available population averages in MNI space

    Python 27 18

  3. antsRegistration-MAGeT antsRegistration-MAGeT Public

    A reimplementation of MAGeTbrain using only ANTs tools.

    Shell 16 6

  4. minc-bpipe-library minc-bpipe-library Public

    Library of bpipe implemented commands commonly applied to minc datafiles, suitable for importing into other pipelines

    Shell 13 8

  5. MINC-VM MINC-VM Public

    Packer built VMs with minc-toolkit and friends

    Shell 7 3

Repositories

Showing 10 of 39 repositories
  • optimized_antsMultivariateTemplateConstruction Public

    A re-implementation of antsMultivariateTemplateConstruction2.sh using optimized image pyramid scale-space and qbatch support

    CoBrALab/optimized_antsMultivariateTemplateConstruction’s past year of commit activity
    Shell 22 8 28 0 Updated Sep 12, 2024
  • ODC-Mouse-Forms Public

    A repo containing OpenDataCapture forms for tracking mouse data gathered from experiments within the CoBra Lab

    CoBrALab/ODC-Mouse-Forms’s past year of commit activity
    TypeScript 0 0 14 10 Updated Sep 10, 2024
  • RABIES Public

    fMRI preprocessing pipeline and analysis tools adapted for rodent images. Visit the full documentation at https://rabies.readthedocs.io/en/stable/

    CoBrALab/RABIES’s past year of commit activity
    Python 35 14 49 3 Updated Sep 3, 2024
  • twolevel_ants_dbm Public

    A twolevel deformation based morphometry pipeline using ants

    CoBrALab/twolevel_ants_dbm’s past year of commit activity
    Python 10 8 19 1 Updated Aug 12, 2024
  • minc-toolkit-extras Public

    Extra miscellaneous scripts for minc-toolkit

    CoBrALab/minc-toolkit-extras’s past year of commit activity
    Shell 6 7 8 0 Updated Jul 29, 2024
  • minc-bpipe-library Public

    Library of bpipe implemented commands commonly applied to minc datafiles, suitable for importing into other pipelines

    CoBrALab/minc-bpipe-library’s past year of commit activity
    Shell 13 8 10 1 Updated Jun 21, 2024
  • MAGeTbrain Public

    Multiple Automatically Generated Templates brain segmentation algorithm

    CoBrALab/MAGeTbrain’s past year of commit activity
    Python 48 25 12 0 Updated Jun 18, 2024
  • HitchhikersGuideToNeuroimaging Public

    The Hitchhiker's Guide To Neuroimaging - All the things HOWTOs don't tell you

    CoBrALab/HitchhikersGuideToNeuroimaging’s past year of commit activity
    1 0 5 0 Updated May 13, 2024
  • UKBB-tabular-processing Public

    Scripts to handle the tabular data associated with the UK BioBank

    CoBrALab/UKBB-tabular-processing’s past year of commit activity
    Python 8 1 7 0 Updated Mar 15, 2024
  • RABIES_tutorial Public
    CoBrALab/RABIES_tutorial’s past year of commit activity
    Jupyter Notebook 1 Apache-2.0 1 0 0 Updated Mar 12, 2024
View all repositories

Top languages

Loading…

Most used topics

Loading…