the brain mask is smaller than the template

[lvqianmri]

Describe the bug
Hi.
I can finish the pipeline successfully, but I found that the brain mask in the commonspace_mask file is smaller than the template. Please see attached image.
Describe RABIES call
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Attach log file
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Attach QC_report
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Additional context
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[gdevenyi]

Please provide information requested in the template.

[Gab-D-G]

Can you compare to the resampled template outputted by RABIES https://rabies.readthedocs.io/en/latest/outputs.html#preprocessing-outputs:~:text=commonspace_resampled_template? This one should match the mask. Your original template file is higher resolution than your EPI seemingly, so the resampling may have to approximate the boundaries and cut out some information to match the lower resolution of your EPI.