Skip to content
@DigitalSlideArchive

Digital Slide Archive

Tools for the management, visualization, and analysis of digital pathology data.

Pinned Loading

  1. digital_slide_archive digital_slide_archive Public

    The official deployment of the Digital Slide Archive and HistomicsTK.

    Python 108 49

  2. HistomicsTK HistomicsTK Public

    A Python toolkit for pathology image analysis algorithms.

    Python 390 114

  3. HistomicsUI HistomicsUI Public

    A Girder plugin for pathology image annotations and analysis.

    JavaScript 56 19

Repositories

Showing 10 of 36 repositories
  • HistomicsStream Public

    A whole-slide image reader for TensorFlow

    DigitalSlideArchive/HistomicsStream’s past year of commit activity
    Python 21 Apache-2.0 6 9 1 Updated Sep 18, 2024
  • superpixel-classification Public

    A test cli for classifying superpixels with arbitrary labels

    DigitalSlideArchive/superpixel-classification’s past year of commit activity
    Python 5 2 1 1 Updated Sep 18, 2024
  • HistomicsTK Public

    A Python toolkit for pathology image analysis algorithms.

    DigitalSlideArchive/HistomicsTK’s past year of commit activity
    Python 390 Apache-2.0 114 20 1 Updated Sep 18, 2024
  • ImageDePHI Public
    DigitalSlideArchive/ImageDePHI’s past year of commit activity
    Python 8 Apache-2.0 0 30 3 Updated Sep 17, 2024
  • wsi-superpixel-guided-labeling Public
    DigitalSlideArchive/wsi-superpixel-guided-labeling’s past year of commit activity
    Vue 3 5 31 0 Updated Sep 17, 2024
  • HistomicsUI Public

    A Girder plugin for pathology image annotations and analysis.

    DigitalSlideArchive/HistomicsUI’s past year of commit activity
    JavaScript 56 Apache-2.0 19 50 0 Updated Sep 11, 2024
  • DSA-WSI-DeID Public

    A workflow for redacting PHI from whole slide images (WSI) based on the Digital Slide Archive.

    DigitalSlideArchive/DSA-WSI-DeID’s past year of commit activity
    Python 13 Apache-2.0 8 15 0 Updated Sep 9, 2024
  • large-image-utilities Public

    Experimental utilities for use with large_image

    DigitalSlideArchive/large-image-utilities’s past year of commit activity
    Python 3 Apache-2.0 1 0 0 Updated Sep 5, 2024
  • ALBench Public

    Benchmarking tool for evaluating Active Learning strategies for machine learning

    DigitalSlideArchive/ALBench’s past year of commit activity
    Python 5 Apache-2.0 3 3 0 Updated Sep 4, 2024
  • dive-dsa Public

    DIVE for Digital Slide Archive

    DigitalSlideArchive/dive-dsa’s past year of commit activity
    Vue 0 Apache-2.0 0 5 3 Updated Sep 4, 2024
View all repositories