Deleted legacy Run schema parsing and dependency

Fix TYPE_CHECKING

pyproject.toml

@@ -25,7 +25,6 @@ license = { file = "LICENSE" }
 dependencies = [
     "nomad-lab>=1.3.0",
     "nomad-schema-plugin-simulation-workflow@git+https://github.com/nomad-coe/nomad-schema-plugin-simulation-workflow.git@develop",
-    "nomad-schema-plugin-run@git+https://github.com/nomad-coe/nomad-schema-plugin-run.git@develop",
     "nomad-simulations>=0.0.2",
 ]
 

src/nomad_parser_wannier90/parsers/band_parser.py

@@ -17,7 +17,10 @@
 # limitations under the License.
 #
 
-from typing import Optional
+from typing import TYPE_CHECKING, Optional
+
+if TYPE_CHECKING:
+    from structlog.stdlib import BoundLogger
 
 import numpy as np
 from nomad.parsing.file_parser import DataTextParser
@@ -31,7 +34,6 @@
 )
 from nomad_simulations.schema_packages.properties import ElectronicBandStructure
 from nomad_simulations.schema_packages.variables import KLinePath
-from structlog.stdlib import BoundLogger
 
 
 class Wannier90BandParser:
@@ -44,7 +46,7 @@ def parse_k_line_path_settings(
         self,
         reciprocal_lattice_vectors: Optional[np.ndarray],
         k_line_path: KLinePathSettings,
-        logger: BoundLogger,
+        logger: 'BoundLogger',
     ) -> None:
         """
         Parse the `KLinePath` settings from the `*band.dat` file using the `KLinePath.resolve_points` method. The
@@ -71,7 +73,7 @@ def parse_band_structure(
         wannier_method: Optional[Wannier],
         k_space: Optional[KSpace],
         model_systems: list[ModelSystem],
-        logger: BoundLogger,
+        logger: 'BoundLogger',
     ) -> Optional[ElectronicBandStructure]:
         """
         Parse the `ElectronicBandStructure` section from the `*band.dat` file.

src/nomad_parser_wannier90/parsers/dos_parser.py

@@ -23,7 +23,7 @@
 from nomad.parsing.file_parser import DataTextParser
 from nomad.units import ureg
 from nomad_simulations.schema_packages.properties import ElectronicDensityOfStates
-from nomad_simulations.schema_packages.variables import Energy2
+from nomad_simulations.schema_packages.variables import Energy2 as Energy
 
 
 class Wannier90DosParser:
@@ -42,7 +42,7 @@ def parse_dos(self) -> Optional[ElectronicDensityOfStates]:
         # TODO add spin polarized case
         data = np.transpose(self.dos_parser.data)
         sec_dos = ElectronicDensityOfStates()
-        energies = Energy2(points=data[0] * ureg.eV)
+        energies = Energy(points=data[0] * ureg.eV)
         sec_dos.variables.append(energies)
         sec_dos.value = data[1] / ureg.eV
         return sec_dos

src/nomad_parser_wannier90/parsers/hr_parser.py

@@ -17,7 +17,10 @@
 # limitations under the License.
 #
 
-from typing import Optional
+from typing import TYPE_CHECKING, Optional
+
+if TYPE_CHECKING:
+    from structlog.stdlib import BoundLogger
 
 import numpy as np
 from nomad.parsing.file_parser import Quantity, TextParser
@@ -28,7 +31,6 @@
     HoppingMatrix,
 )
 from nomad_simulations.schema_packages.variables import WignerSeitz
-from structlog.stdlib import BoundLogger
 
 
 class HrParser(TextParser):
@@ -46,7 +48,7 @@ def __init__(self, hr_file: str = ''):
         self.hr_parser = HrParser(mainfile=hr_file)
 
     def parse_hoppings(
-        self, wannier_method: Optional[Wannier], logger: BoundLogger
+        self, wannier_method: Optional[Wannier], logger: 'BoundLogger'
     ) -> tuple[Optional[HoppingMatrix], Optional[CrystalFieldSplitting]]:
         """
         Parse the `HoppingMatrix` and `CrystalFieldSplitting` sections from the `*hr.dat` file.