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1. Rcourse Rcourse Public

   Introduction to R programming for data science

   HTML 2 3

2. icbi-lab/quanTIseq icbi-lab/quanTIseq Public

   a computational pipeline for the quantification of the Tumor Immune contexture from human RNA-seq data

   R 18 10

3. scverse/scirpy scverse/scirpy Public

   A scanpy extension to analyse single-cell TCR and BCR data.

   Python 214 34

4. federicomarini/quantiseqr federicomarini/quantiseqr Public

   TeX 2

5. olapuentesantana/easier olapuentesantana/easier Public

   R package to use EaSIeR to predict anti-tumor immune response from bulk RNA-seq

   R 12 1

6. omnideconv/immunedeconv omnideconv/immunedeconv Public

   A unified interface to immune deconvolution methods (CIBERSORT, EPIC, quanTIseq, TIMER, xCell, MCPcounter) and mouse deconvolution methods

   R 440 101