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Calling doesn't work when a region contains only T in the reference #96

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mfoll opened this issue Mar 18, 2016 · 0 comments
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Calling doesn't work when a region contains only T in the reference #96

mfoll opened this issue Mar 18, 2016 · 0 comments
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v0.3

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mfoll commented Mar 18, 2016

This is because when R reads the pileup files here Tin the reference are converted automatically to booleans TRUE by read.table.
@mfoll mfoll added the bug label Mar 18, 2016
@mfoll mfoll self-assigned this Mar 18, 2016
@mfoll mfoll added this to the v0.3 milestone Mar 18, 2016
mfoll added a commit that referenced this issue Mar 18, 2016
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Specifies type of columns when reading pileup files in R
94bb0e9 
This prevents R from converting `T`to `TRUE` when calling in regions containing only `T` references. Solves #96
@mfoll mfoll mentioned this issue Mar 18, 2016
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@mfoll mfoll closed this as completed Mar 18, 2016
@mfoll mfoll removed the bug label Mar 18, 2016
@mfoll mfoll added the bug label Apr 25, 2016
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