MEMOIR

MATLAB toolbox for Mixed Effect Model InfeRence

Install

You can either clone the MEMOIR repository via git clone [email protected]:ICB-DCM/MEMOIR.git, or download the repository, or download the latest release archive. The top-level folder of the cloned repository or the unpacked archive needs to be added to the MATLAB search path (non-recursively).

Use

Examples can be found in the examples folder.

Name		Name	Last commit message	Last commit date
Latest commit History 113 Commits
examples		examples
.gitignore		.gitignore
LICENSE		LICENSE
README.rst		README.rst
bhat_SCTL_si.m		bhat_SCTL_si.m
build_sigma_noise.m		build_sigma_noise.m
build_sigma_time.m		build_sigma_time.m
chainrule.m		chainrule.m
chainrule_ddxdydy_dydz.m		chainrule_ddxdydy_dydz.m
chainrule_ddxdydy_dydz_dydv.m		chainrule_ddxdydy_dydz_dydv.m
complete_model.m		complete_model.m
getBhat.m		getBhat.m
getSCTLfits.m		getSCTLfits.m
getSimulationMEMOIR.m		getSimulationMEMOIR.m
getSimulationPA.m		getSimulationPA.m
getSimulationSCSH.m		getSimulationSCSH.m
logLMEMOIR.m		logLMEMOIR.m
logL_CE_w_grad_1.m		logL_CE_w_grad_1.m
logL_CE_w_grad_2.m		logL_CE_w_grad_2.m
logL_CE_w_grad_3.m		logL_CE_w_grad_3.m
logL_PA.m		logL_PA.m
logL_SCSH.m		logL_SCSH.m
logL_SCTL.m		logL_SCTL.m
logL_SCTL_si.m		logL_SCTL_si.m
logL_SCTL_single.m		logL_SCTL_single.m
lognormal_noise.m		lognormal_noise.m
make_model.m		make_model.m
mfun.m		mfun.m
normal_noise.m		normal_noise.m
normal_noise_optims.m		normal_noise_optims.m
normal_param.m		normal_param.m
normal_time.m		normal_time.m
normal_time_optims.m		normal_time_optims.m
objective_SCTL_s1.m		objective_SCTL_s1.m
objective_phi.m		objective_phi.m
objective_phi_wrapper.m		objective_phi_wrapper.m
optimize_SCTL_si.m		optimize_SCTL_si.m
penal_param.m		penal_param.m
plotPA.m		plotPA.m
plotPAt0.m		plotPAt0.m
plotSCSH.m		plotSCSH.m
plotSCSHhisto.m		plotSCSHhisto.m
plotSCTL.m		plotSCTL.m
plotSCTLstat.m		plotSCTLstat.m
setdefault.m		setdefault.m
simulateForSP.m		simulateForSP.m
simulate_trajectory.m		simulate_trajectory.m
tdist_noise.m		tdist_noise.m
validate_logL_CE_w_grad_2.m		validate_logL_CE_w_grad_2.m

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