BUG: Only wrap for real pixel types #3
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Segfault will occur running with integer pixel types.
thewtex
added a commit
that referenced
this pull request
Jul 19, 2024
Rebase wasm patches for elastix. Bump itk-wasm and the ITK-Wasm docker image for ITK 5.4.0 support. Disable a wasi test with an odd error: 3: Test command: /wasi-runtimes/wasmtime/bin/wasmtime-pwd.sh "/work/wasi-build/elastix.wasi.wasm" "/work/wasm/test/data/input/parameters_single.json" "/work/wasi-build/wasm/CT_2D_head_registered_initial.iwi.cbor" "/work/wasi-build/wasm/CT_2D_head_initial.h5" "/work/wasi-build/wasm/CT_2D_head_initial.json" "-f" "/work/wasm/test/data/input/CT_2D_head_fixed.iwi.cbor" "-m" "/work/wasm/test/data/input/CT_2D_head_moving.iwi.cbor" "-i" "/work/wasm/test/data/input/CT_2D_head_translation.h5" 3: Working Directory: /work/wasi-build/wasm 3: Test timeout computed to be: 10000000 3: Error: failed to run main module `/work/wasi-build/elastix.wasi.wasm` 3: 3: Caused by: 3: 0: failed to invoke command default 3: 1: error while executing at wasm backtrace: 3: 0: 0x388ff6 - elastix.wasi.wasm!__cxx_global_array_dtor.54 3: 1: 0x95b08 - elastix.wasi.wasm!__funcs_on_exit 3: 2: 0x95cb2 - elastix.wasi.wasm!__wasm_call_dtors 3: 3: 0x15df748 - elastix.wasi.wasm!itk_wasm_delayed_exit 3: 4: 0x15df7d1 - elastix.wasi.wasm!_start 3: note: using the `WASMTIME_BACKTRACE_DETAILS=1` environment variable may show more debugging information 3: 2: wasm trap: uninitialized element 3/10 Test #3: elastix-wasm-2d-initial-transform-test ....................***Failed 7.99 sec
thewtex
added a commit
that referenced
this pull request
Jul 19, 2024
Rebase wasm patches for elastix. Bump itk-wasm and the ITK-Wasm docker image for ITK 5.4.0 support. Disable a wasi test with an odd error: 3: Test command: /wasi-runtimes/wasmtime/bin/wasmtime-pwd.sh "/work/wasi-build/elastix.wasi.wasm" "/work/wasm/test/data/input/parameters_single.json" "/work/wasi-build/wasm/CT_2D_head_registered_initial.iwi.cbor" "/work/wasi-build/wasm/CT_2D_head_initial.h5" "/work/wasi-build/wasm/CT_2D_head_initial.json" "-f" "/work/wasm/test/data/input/CT_2D_head_fixed.iwi.cbor" "-m" "/work/wasm/test/data/input/CT_2D_head_moving.iwi.cbor" "-i" "/work/wasm/test/data/input/CT_2D_head_translation.h5" 3: Working Directory: /work/wasi-build/wasm 3: Test timeout computed to be: 10000000 3: Error: failed to run main module `/work/wasi-build/elastix.wasi.wasm` 3: 3: Caused by: 3: 0: failed to invoke command default 3: 1: error while executing at wasm backtrace: 3: 0: 0x388ff6 - elastix.wasi.wasm!__cxx_global_array_dtor.54 3: 1: 0x95b08 - elastix.wasi.wasm!__funcs_on_exit 3: 2: 0x95cb2 - elastix.wasi.wasm!__wasm_call_dtors 3: 3: 0x15df748 - elastix.wasi.wasm!itk_wasm_delayed_exit 3: 4: 0x15df7d1 - elastix.wasi.wasm!_start 3: note: using the `WASMTIME_BACKTRACE_DETAILS=1` environment variable may show more debugging information 3: 2: wasm trap: uninitialized element 3/10 Test #3: elastix-wasm-2d-initial-transform-test ....................***Failed 7.99 sec
thewtex
added a commit
that referenced
this pull request
Jul 19, 2024
Rebase wasm patches for elastix. Bump itk-wasm and the ITK-Wasm docker image for ITK 5.4.0 support. Disable a wasi test with an odd error: 3: Test command: /wasi-runtimes/wasmtime/bin/wasmtime-pwd.sh "/work/wasi-build/elastix.wasi.wasm" "/work/wasm/test/data/input/parameters_single.json" "/work/wasi-build/wasm/CT_2D_head_registered_initial.iwi.cbor" "/work/wasi-build/wasm/CT_2D_head_initial.h5" "/work/wasi-build/wasm/CT_2D_head_initial.json" "-f" "/work/wasm/test/data/input/CT_2D_head_fixed.iwi.cbor" "-m" "/work/wasm/test/data/input/CT_2D_head_moving.iwi.cbor" "-i" "/work/wasm/test/data/input/CT_2D_head_translation.h5" 3: Working Directory: /work/wasi-build/wasm 3: Test timeout computed to be: 10000000 3: Error: failed to run main module `/work/wasi-build/elastix.wasi.wasm` 3: 3: Caused by: 3: 0: failed to invoke command default 3: 1: error while executing at wasm backtrace: 3: 0: 0x388ff6 - elastix.wasi.wasm!__cxx_global_array_dtor.54 3: 1: 0x95b08 - elastix.wasi.wasm!__funcs_on_exit 3: 2: 0x95cb2 - elastix.wasi.wasm!__wasm_call_dtors 3: 3: 0x15df748 - elastix.wasi.wasm!itk_wasm_delayed_exit 3: 4: 0x15df7d1 - elastix.wasi.wasm!_start 3: note: using the `WASMTIME_BACKTRACE_DETAILS=1` environment variable may show more debugging information 3: 2: wasm trap: uninitialized element 3/10 Test #3: elastix-wasm-2d-initial-transform-test ....................***Failed 7.99 sec
thewtex
added a commit
that referenced
this pull request
Jul 19, 2024
Rebase wasm patches for elastix. Bump itk-wasm and the ITK-Wasm docker image for ITK 5.4.0 support. Disable a wasi test with an odd error: ``` 3: Test command: /wasi-runtimes/wasmtime/bin/wasmtime-pwd.sh "/work/wasi-build/elastix.wasi.wasm" "/work/wasm/test/data/input/parameters_single.json" "/work/wasi-build/wasm/CT_2D_head_registered_initial.iwi.cbor" "/work/wasi-build/wasm/CT_2D_head_initial.h5" "/work/wasi-build/wasm/CT_2D_head_initial.json" "-f" "/work/wasm/test/data/input/CT_2D_head_fixed.iwi.cbor" "-m" "/work/wasm/test/data/input/CT_2D_head_moving.iwi.cbor" "-i" "/work/wasm/test/data/input/CT_2D_head_translation.h5" 3: Working Directory: /work/wasi-build/wasm 3: Test timeout computed to be: 10000000 3: Error: failed to run main module `/work/wasi-build/elastix.wasi.wasm` 3: 3: Caused by: 3: 0: failed to invoke command default 3: 1: error while executing at wasm backtrace: 3: 0: 0x388ff6 - elastix.wasi.wasm!__cxx_global_array_dtor.54 3: 1: 0x95b08 - elastix.wasi.wasm!__funcs_on_exit 3: 2: 0x95cb2 - elastix.wasi.wasm!__wasm_call_dtors 3: 3: 0x15df748 - elastix.wasi.wasm!itk_wasm_delayed_exit 3: 4: 0x15df7d1 - elastix.wasi.wasm!_start 3: note: using the `WASMTIME_BACKTRACE_DETAILS=1` environment variable may show more debugging information 3: 2: wasm trap: uninitialized element 3/10 Test #3: elastix-wasm-2d-initial-transform-test ....................***Failed 7.99 sec ``` Also update CI configuration accordingly.
thewtex
added a commit
that referenced
this pull request
Jul 19, 2024
Rebase wasm patches for elastix. Bump itk-wasm and the ITK-Wasm docker image for ITK 5.4.0 support. Disable a wasi test with an odd error: ``` 3: Test command: /wasi-runtimes/wasmtime/bin/wasmtime-pwd.sh "/work/wasi-build/elastix.wasi.wasm" "/work/wasm/test/data/input/parameters_single.json" "/work/wasi-build/wasm/CT_2D_head_registered_initial.iwi.cbor" "/work/wasi-build/wasm/CT_2D_head_initial.h5" "/work/wasi-build/wasm/CT_2D_head_initial.json" "-f" "/work/wasm/test/data/input/CT_2D_head_fixed.iwi.cbor" "-m" "/work/wasm/test/data/input/CT_2D_head_moving.iwi.cbor" "-i" "/work/wasm/test/data/input/CT_2D_head_translation.h5" 3: Working Directory: /work/wasi-build/wasm 3: Test timeout computed to be: 10000000 3: Error: failed to run main module `/work/wasi-build/elastix.wasi.wasm` 3: 3: Caused by: 3: 0: failed to invoke command default 3: 1: error while executing at wasm backtrace: 3: 0: 0x388ff6 - elastix.wasi.wasm!__cxx_global_array_dtor.54 3: 1: 0x95b08 - elastix.wasi.wasm!__funcs_on_exit 3: 2: 0x95cb2 - elastix.wasi.wasm!__wasm_call_dtors 3: 3: 0x15df748 - elastix.wasi.wasm!itk_wasm_delayed_exit 3: 4: 0x15df7d1 - elastix.wasi.wasm!_start 3: note: using the `WASMTIME_BACKTRACE_DETAILS=1` environment variable may show more debugging information 3: 2: wasm trap: uninitialized element 3/10 Test #3: elastix-wasm-2d-initial-transform-test ....................***Failed 7.99 sec ``` Also update CI configuration accordingly.
thewtex
added a commit
that referenced
this pull request
Jul 19, 2024
Rebase wasm patches for elastix. Bump itk-wasm and the ITK-Wasm docker image for ITK 5.4.0 support. Disable a wasi test with an odd error: ``` 3: Test command: /wasi-runtimes/wasmtime/bin/wasmtime-pwd.sh "/work/wasi-build/elastix.wasi.wasm" "/work/wasm/test/data/input/parameters_single.json" "/work/wasi-build/wasm/CT_2D_head_registered_initial.iwi.cbor" "/work/wasi-build/wasm/CT_2D_head_initial.h5" "/work/wasi-build/wasm/CT_2D_head_initial.json" "-f" "/work/wasm/test/data/input/CT_2D_head_fixed.iwi.cbor" "-m" "/work/wasm/test/data/input/CT_2D_head_moving.iwi.cbor" "-i" "/work/wasm/test/data/input/CT_2D_head_translation.h5" 3: Working Directory: /work/wasi-build/wasm 3: Test timeout computed to be: 10000000 3: Error: failed to run main module `/work/wasi-build/elastix.wasi.wasm` 3: 3: Caused by: 3: 0: failed to invoke command default 3: 1: error while executing at wasm backtrace: 3: 0: 0x388ff6 - elastix.wasi.wasm!__cxx_global_array_dtor.54 3: 1: 0x95b08 - elastix.wasi.wasm!__funcs_on_exit 3: 2: 0x95cb2 - elastix.wasi.wasm!__wasm_call_dtors 3: 3: 0x15df748 - elastix.wasi.wasm!itk_wasm_delayed_exit 3: 4: 0x15df7d1 - elastix.wasi.wasm!_start 3: note: using the `WASMTIME_BACKTRACE_DETAILS=1` environment variable may show more debugging information 3: 2: wasm trap: uninitialized element 3/10 Test #3: elastix-wasm-2d-initial-transform-test ....................***Failed 7.99 sec ``` Also update CI configuration accordingly.
thewtex
added a commit
that referenced
this pull request
Aug 12, 2024
Rebase wasm patches for elastix. Bump itk-wasm and the ITK-Wasm docker image for ITK 5.4.0 support. Disable a wasi test with an odd error: ``` 3: Test command: /wasi-runtimes/wasmtime/bin/wasmtime-pwd.sh "/work/wasi-build/elastix.wasi.wasm" "/work/wasm/test/data/input/parameters_single.json" "/work/wasi-build/wasm/CT_2D_head_registered_initial.iwi.cbor" "/work/wasi-build/wasm/CT_2D_head_initial.h5" "/work/wasi-build/wasm/CT_2D_head_initial.json" "-f" "/work/wasm/test/data/input/CT_2D_head_fixed.iwi.cbor" "-m" "/work/wasm/test/data/input/CT_2D_head_moving.iwi.cbor" "-i" "/work/wasm/test/data/input/CT_2D_head_translation.h5" 3: Working Directory: /work/wasi-build/wasm 3: Test timeout computed to be: 10000000 3: Error: failed to run main module `/work/wasi-build/elastix.wasi.wasm` 3: 3: Caused by: 3: 0: failed to invoke command default 3: 1: error while executing at wasm backtrace: 3: 0: 0x388ff6 - elastix.wasi.wasm!__cxx_global_array_dtor.54 3: 1: 0x95b08 - elastix.wasi.wasm!__funcs_on_exit 3: 2: 0x95cb2 - elastix.wasi.wasm!__wasm_call_dtors 3: 3: 0x15df748 - elastix.wasi.wasm!itk_wasm_delayed_exit 3: 4: 0x15df7d1 - elastix.wasi.wasm!_start 3: note: using the `WASMTIME_BACKTRACE_DETAILS=1` environment variable may show more debugging information 3: 2: wasm trap: uninitialized element 3/10 Test #3: elastix-wasm-2d-initial-transform-test ....................***Failed 7.99 sec ``` Also update CI configuration accordingly.
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Segfault will occur running with integer pixel types.