Skip to content
New issue

Have a question about this project? Sign up for a free GitHub account to open an issue and contact its maintainers and the community.

By clicking “Sign up for GitHub”, you agree to our terms of service and privacy statement. We’ll occasionally send you account related emails.

Already on GitHub? Sign in to your account

[SBML] FbcModelPlugin missing functions patch #5224

Merged
merged 1 commit into from
Jul 25, 2022
Merged

[SBML] FbcModelPlugin missing functions patch #5224

merged 1 commit into from
Jul 25, 2022

Conversation

exaexa
Copy link
Contributor

@exaexa exaexa commented Jul 25, 2022

This adds code from sbmlteam/libsbml#252 to allow
development and deployment before upstream merges and releases the patched
version.

This adds code from sbmlteam/libsbml#252 to allow
development and deployment before upstream merges and releases the pathed
version.
@giordano giordano merged commit b99a1b5 into JuliaPackaging:master Jul 25, 2022
eschnett added a commit to eschnett/Yggdrasil that referenced this pull request Jul 25, 2022
* master: (50 commits)
  iso_codes v4.10.0 (JuliaPackaging#5226)
  PTSCOTCH: Require MPItrampoline 5, and build with OpenMPI as well (JuliaPackaging#5180)
  MAGEMin: Require MPItrampoline 5 (JuliaPackaging#5222)
  LAMMPS: Require MPItrampoline 5 (JuliaPackaging#5221)
  CrypoMiniSat: Require MPItrampoline 5 (JuliaPackaging#5219)
  PETSc: Require MPItrampoline 5 (JuliaPackaging#5223)
  [SBML] missing functions patch (JuliaPackaging#5224)
  HYPRE: Require MPItrampoline 5 (JuliaPackaging#5220)
  openPMD_api: Require MPItrampoline 5 (JuliaPackaging#5218)
  COSMA: Simplify configuring OpenMPI (JuliaPackaging#5217)
  AMReX: Require MPItrampoline 5 (JuliaPackaging#5215)
  Register Elfutils executables. (JuliaPackaging#5214)
  Wizard recipe: DDSCAT-v7.3.3 (JuliaPackaging#5210)
  ADIOS2: Require MPItrampoline 5 (JuliaPackaging#5212)
  Bump compat bounds of Python_jll dependencies. (JuliaPackaging#5211)
  mpi.jl: Require version 5 of MPItrampoline (JuliaPackaging#5209)
  [web3go] Add new package (JuliaPackaging#5195)
  add tls config patch for FLINT 2.9.0 (JuliaPackaging#5207)
  Upgrade enzyme to refs/tags/v0.0.35 (JuliaPackaging#5200)
  [PROJ] bump version to 9.0.1 (JuliaPackaging#5208)
  ...
eschnett added a commit to eschnett/Yggdrasil that referenced this pull request Jul 25, 2022
* master: (45 commits)
  iso_codes v4.10.0 (JuliaPackaging#5226)
  PTSCOTCH: Require MPItrampoline 5, and build with OpenMPI as well (JuliaPackaging#5180)
  MAGEMin: Require MPItrampoline 5 (JuliaPackaging#5222)
  LAMMPS: Require MPItrampoline 5 (JuliaPackaging#5221)
  CrypoMiniSat: Require MPItrampoline 5 (JuliaPackaging#5219)
  PETSc: Require MPItrampoline 5 (JuliaPackaging#5223)
  [SBML] missing functions patch (JuliaPackaging#5224)
  HYPRE: Require MPItrampoline 5 (JuliaPackaging#5220)
  openPMD_api: Require MPItrampoline 5 (JuliaPackaging#5218)
  COSMA: Simplify configuring OpenMPI (JuliaPackaging#5217)
  AMReX: Require MPItrampoline 5 (JuliaPackaging#5215)
  Register Elfutils executables. (JuliaPackaging#5214)
  Wizard recipe: DDSCAT-v7.3.3 (JuliaPackaging#5210)
  ADIOS2: Require MPItrampoline 5 (JuliaPackaging#5212)
  Bump compat bounds of Python_jll dependencies. (JuliaPackaging#5211)
  mpi.jl: Require version 5 of MPItrampoline (JuliaPackaging#5209)
  [web3go] Add new package (JuliaPackaging#5195)
  add tls config patch for FLINT 2.9.0 (JuliaPackaging#5207)
  Upgrade enzyme to refs/tags/v0.0.35 (JuliaPackaging#5200)
  [PROJ] bump version to 9.0.1 (JuliaPackaging#5208)
  ...
eschnett added a commit to eschnett/Yggdrasil that referenced this pull request Jul 25, 2022
* master: (62 commits)
  iso_codes v4.10.0 (JuliaPackaging#5226)
  PTSCOTCH: Require MPItrampoline 5, and build with OpenMPI as well (JuliaPackaging#5180)
  MAGEMin: Require MPItrampoline 5 (JuliaPackaging#5222)
  LAMMPS: Require MPItrampoline 5 (JuliaPackaging#5221)
  CrypoMiniSat: Require MPItrampoline 5 (JuliaPackaging#5219)
  PETSc: Require MPItrampoline 5 (JuliaPackaging#5223)
  [SBML] missing functions patch (JuliaPackaging#5224)
  HYPRE: Require MPItrampoline 5 (JuliaPackaging#5220)
  openPMD_api: Require MPItrampoline 5 (JuliaPackaging#5218)
  COSMA: Simplify configuring OpenMPI (JuliaPackaging#5217)
  AMReX: Require MPItrampoline 5 (JuliaPackaging#5215)
  Register Elfutils executables. (JuliaPackaging#5214)
  Wizard recipe: DDSCAT-v7.3.3 (JuliaPackaging#5210)
  ADIOS2: Require MPItrampoline 5 (JuliaPackaging#5212)
  Bump compat bounds of Python_jll dependencies. (JuliaPackaging#5211)
  mpi.jl: Require version 5 of MPItrampoline (JuliaPackaging#5209)
  [web3go] Add new package (JuliaPackaging#5195)
  add tls config patch for FLINT 2.9.0 (JuliaPackaging#5207)
  Upgrade enzyme to refs/tags/v0.0.35 (JuliaPackaging#5200)
  [PROJ] bump version to 9.0.1 (JuliaPackaging#5208)
  ...
eschnett added a commit to eschnett/Yggdrasil that referenced this pull request Jul 25, 2022
* master: (49 commits)
  LaMEM: Support MPItrampoline (JuliaPackaging#5229)
  [VMEC] Update dependency versions (JuliaPackaging#5184)
  [xycewrapper] add julia 1.8 support (JuliaPackaging#5228)
  Elemental: Require MPItrampoline 5, enable OpenMPI (JuliaPackaging#5185)
  P4est: Support MPItrampoline (JuliaPackaging#5163)
  SCALAPACK: Support MPItrampoline (JuliaPackaging#5167)
  iso_codes v4.10.0 (JuliaPackaging#5226)
  PTSCOTCH: Require MPItrampoline 5, and build with OpenMPI as well (JuliaPackaging#5180)
  MAGEMin: Require MPItrampoline 5 (JuliaPackaging#5222)
  LAMMPS: Require MPItrampoline 5 (JuliaPackaging#5221)
  CrypoMiniSat: Require MPItrampoline 5 (JuliaPackaging#5219)
  PETSc: Require MPItrampoline 5 (JuliaPackaging#5223)
  [SBML] missing functions patch (JuliaPackaging#5224)
  HYPRE: Require MPItrampoline 5 (JuliaPackaging#5220)
  openPMD_api: Require MPItrampoline 5 (JuliaPackaging#5218)
  COSMA: Simplify configuring OpenMPI (JuliaPackaging#5217)
  AMReX: Require MPItrampoline 5 (JuliaPackaging#5215)
  Register Elfutils executables. (JuliaPackaging#5214)
  Wizard recipe: DDSCAT-v7.3.3 (JuliaPackaging#5210)
  ADIOS2: Require MPItrampoline 5 (JuliaPackaging#5212)
  ...
eschnett added a commit to eschnett/Yggdrasil that referenced this pull request Jul 25, 2022
* master: (49 commits)
  LaMEM: Support MPItrampoline (JuliaPackaging#5229)
  [VMEC] Update dependency versions (JuliaPackaging#5184)
  [xycewrapper] add julia 1.8 support (JuliaPackaging#5228)
  Elemental: Require MPItrampoline 5, enable OpenMPI (JuliaPackaging#5185)
  P4est: Support MPItrampoline (JuliaPackaging#5163)
  SCALAPACK: Support MPItrampoline (JuliaPackaging#5167)
  iso_codes v4.10.0 (JuliaPackaging#5226)
  PTSCOTCH: Require MPItrampoline 5, and build with OpenMPI as well (JuliaPackaging#5180)
  MAGEMin: Require MPItrampoline 5 (JuliaPackaging#5222)
  LAMMPS: Require MPItrampoline 5 (JuliaPackaging#5221)
  CrypoMiniSat: Require MPItrampoline 5 (JuliaPackaging#5219)
  PETSc: Require MPItrampoline 5 (JuliaPackaging#5223)
  [SBML] missing functions patch (JuliaPackaging#5224)
  HYPRE: Require MPItrampoline 5 (JuliaPackaging#5220)
  openPMD_api: Require MPItrampoline 5 (JuliaPackaging#5218)
  COSMA: Simplify configuring OpenMPI (JuliaPackaging#5217)
  AMReX: Require MPItrampoline 5 (JuliaPackaging#5215)
  Register Elfutils executables. (JuliaPackaging#5214)
  Wizard recipe: DDSCAT-v7.3.3 (JuliaPackaging#5210)
  ADIOS2: Require MPItrampoline 5 (JuliaPackaging#5212)
  ...
eschnett added a commit to eschnett/Yggdrasil that referenced this pull request Jul 26, 2022
* master: (69 commits)
  SCALAPACK32: Support MPItrampoline (JuliaPackaging#5230)
  LaMEM: Support MPItrampoline (JuliaPackaging#5229)
  [VMEC] Update dependency versions (JuliaPackaging#5184)
  [xycewrapper] add julia 1.8 support (JuliaPackaging#5228)
  Elemental: Require MPItrampoline 5, enable OpenMPI (JuliaPackaging#5185)
  P4est: Support MPItrampoline (JuliaPackaging#5163)
  SCALAPACK: Support MPItrampoline (JuliaPackaging#5167)
  iso_codes v4.10.0 (JuliaPackaging#5226)
  PTSCOTCH: Require MPItrampoline 5, and build with OpenMPI as well (JuliaPackaging#5180)
  MAGEMin: Require MPItrampoline 5 (JuliaPackaging#5222)
  LAMMPS: Require MPItrampoline 5 (JuliaPackaging#5221)
  CrypoMiniSat: Require MPItrampoline 5 (JuliaPackaging#5219)
  PETSc: Require MPItrampoline 5 (JuliaPackaging#5223)
  [SBML] missing functions patch (JuliaPackaging#5224)
  HYPRE: Require MPItrampoline 5 (JuliaPackaging#5220)
  openPMD_api: Require MPItrampoline 5 (JuliaPackaging#5218)
  COSMA: Simplify configuring OpenMPI (JuliaPackaging#5217)
  AMReX: Require MPItrampoline 5 (JuliaPackaging#5215)
  Register Elfutils executables. (JuliaPackaging#5214)
  Wizard recipe: DDSCAT-v7.3.3 (JuliaPackaging#5210)
  ...
eschnett added a commit to eschnett/Yggdrasil that referenced this pull request Aug 4, 2022
* master: (51 commits)
  LaMEM: Support MPItrampoline (JuliaPackaging#5229)
  [VMEC] Update dependency versions (JuliaPackaging#5184)
  [xycewrapper] add julia 1.8 support (JuliaPackaging#5228)
  Elemental: Require MPItrampoline 5, enable OpenMPI (JuliaPackaging#5185)
  P4est: Support MPItrampoline (JuliaPackaging#5163)
  SCALAPACK: Support MPItrampoline (JuliaPackaging#5167)
  iso_codes v4.10.0 (JuliaPackaging#5226)
  PTSCOTCH: Require MPItrampoline 5, and build with OpenMPI as well (JuliaPackaging#5180)
  MAGEMin: Require MPItrampoline 5 (JuliaPackaging#5222)
  LAMMPS: Require MPItrampoline 5 (JuliaPackaging#5221)
  CrypoMiniSat: Require MPItrampoline 5 (JuliaPackaging#5219)
  PETSc: Require MPItrampoline 5 (JuliaPackaging#5223)
  [SBML] missing functions patch (JuliaPackaging#5224)
  HYPRE: Require MPItrampoline 5 (JuliaPackaging#5220)
  openPMD_api: Require MPItrampoline 5 (JuliaPackaging#5218)
  COSMA: Simplify configuring OpenMPI (JuliaPackaging#5217)
  AMReX: Require MPItrampoline 5 (JuliaPackaging#5215)
  Register Elfutils executables. (JuliaPackaging#5214)
  Wizard recipe: DDSCAT-v7.3.3 (JuliaPackaging#5210)
  ADIOS2: Require MPItrampoline 5 (JuliaPackaging#5212)
  ...
Sign up for free to join this conversation on GitHub. Already have an account? Sign in to comment
Labels
None yet
Projects
None yet
Development

Successfully merging this pull request may close these issues.

2 participants