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Cholesky-2.0

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@cfhammill cfhammill released this 12 Jul 14:48
· 117 commits to master since this release
  • Rewrite parallel docs to reflect change to batchtools
  • Add configuration passing for parallel functions
  • Rewrite of anatGetAll for multi-mode. Subject specific
    atlases can be passed for computing summaries, useful
    for DTI with MAGeT
  • Allow shinyRMINC to be run with mincSingleDim's
  • Allow shinyRMINC to use an FDR object to select thresholds
  • Add slider for dynamic upper limit setting in shinyRMINC
  • Mention the MINC_FILE_CACHE_MB variable in the docs to help
    fix memory issues especially with parallel jobs
  • Implements a transposed vertexApply for subject specific
    summaries
  • Allows colour setting in vis2D
  • Refactor 3D plotting code to improve legend placement
  • Better symmetric palettes for 3D plots
  • Fix the parallel memory variable for batchtools
  • Adds a timeout for lsof to stop NFS issues killing RMINC
  • Minor fix for new lmerTest
  • Expose mincRandomize (WIP sharp edges expected)
  • Nice new c++ API for working with minc volumes in RMINC
    internals.