Adding miRDeep2 execs to $PATH

OpenOmics · Jul 6, 2023 · 7e5e43b · 7e5e43b
1 parent 11c8b5d
commit 7e5e43b
Showing 1 changed file with 3 additions and 1 deletion.
diff --git a/docker/mir-seek/Dockerfile b/docker/mir-seek/Dockerfile
@@ -177,6 +177,8 @@ RUN mkdir -p /opt2/mirdeep2/0.1.3-c6440e2/ \
     && cd /opt2/mirdeep2/0.1.3-c6440e2/ \
     && perl install.pl \
     && touch /opt2/mirdeep2/0.1.3-c6440e2/install_successful
+ENV PATH="${PATH}:/opt2/mirdeep2/0.1.3-c6440e2/bin"
+WORKDIR /opt2
 
 
 ################ POST #################
@@ -185,4 +187,4 @@ RUN mkdir -p /opt2/mirdeep2/0.1.3-c6440e2/ \
 ADD Dockerfile /opt2/mir-seek.dockerfile
 RUN chmod -R a+rX /opt2
 ENV PATH="/opt2:$PATH"
-WORKDIR /data2
+WORKDIR /data2