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@TheFraserLab

Fraser Lab

The Hunter Fraser Lab at Stanford University

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  1. ASEr ASEr Public

    Get ASE counts from BAMs or raw fastq data -- repackage of pipeline by Carlo Artieri

    Python 6 3

  2. Hornet Hornet Public

    Forked from bmvdgeijn/WASP

    Simple tools for unbiased allele-specific read mapping based on WASP by the Pritchard lab

    Python 6 3

  3. cisVar cisVar Public

    Forked from tehranchi/cisVar

    cisVar scripts.

    Python 5

  4. Agoglia_HumanChimpanzee2020 Agoglia_HumanChimpanzee2020 Public

    Code used for data analysis and figure making for the human-chimpanzee cell fusion project/manuscript.

    R 4

  5. enrich_pvalues enrich_pvalues Public

    Compare one dataset to another at a variety of p-value cutoffs to pick the best p-value

    Python 2

  6. scripts scripts Public

    A collection of single scripts that do not need their own repository

    Python 1

Repositories

Showing 10 of 13 repositories
  • crispey3-epistasis Public Forked from roy-ang/crispey3-epistasis

    Code for designing CRISPEY-BAR library and data processing of sequencing reads for yeast epistasis project

    TheFraserLab/crispey3-epistasis’s past year of commit activity
    Jupyter Notebook 0 1 0 0 Updated May 14, 2022
  • fraser_code Public

    Commonly used code from the Fraser Lab

    TheFraserLab/fraser_code’s past year of commit activity
    R 0 1 0 0 Updated Mar 16, 2021
  • Agoglia_HumanChimpanzee2020 Public

    Code used for data analysis and figure making for the human-chimpanzee cell fusion project/manuscript.

    TheFraserLab/Agoglia_HumanChimpanzee2020’s past year of commit activity
    R 4 MIT 0 0 0 Updated Nov 28, 2020
  • Hornet Public Forked from bmvdgeijn/WASP

    Simple tools for unbiased allele-specific read mapping based on WASP by the Pritchard lab

    TheFraserLab/Hornet’s past year of commit activity
    Python 6 Apache-2.0 52 0 0 Updated Nov 28, 2020
  • SCREECh Public Forked from petercombs/MPRA_selection
    TheFraserLab/SCREECh’s past year of commit activity
    Python 0 1 0 0 Updated May 21, 2019
  • dicty Public Forked from petercombs/dicty
    TheFraserLab/dicty’s past year of commit activity
    Python 0 1 0 0 Updated May 21, 2019
  • CombsOenocytes2018 Public
    TheFraserLab/CombsOenocytes2018’s past year of commit activity
    Python 0 0 0 0 Updated Sep 26, 2018
  • ASEr Public

    Get ASE counts from BAMs or raw fastq data -- repackage of pipeline by Carlo Artieri

    TheFraserLab/ASEr’s past year of commit activity
    Python 6 MIT 3 9 2 Updated Aug 15, 2018
  • HybridSliceSeq Public Forked from petercombs/HybridSliceSeq
    TheFraserLab/HybridSliceSeq’s past year of commit activity
    Python 1 1 0 0 Updated Jun 18, 2018
  • enrich_pvalues Public

    Compare one dataset to another at a variety of p-value cutoffs to pick the best p-value

    TheFraserLab/enrich_pvalues’s past year of commit activity
    Python 2 MIT 0 0 0 Updated Jun 1, 2018
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