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MIDI resistance not reported when whole genome is unmapped #462

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donkirkby opened this issue Mar 15, 2019 · 0 comments
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MIDI resistance not reported when whole genome is unmapped #462

donkirkby opened this issue Mar 15, 2019 · 0 comments

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@donkirkby
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Sample 89917A-HCV_S50 from the 14-Dec-2018.M01841 run mapped nicely in the MIDI sample, but the NS5b region of the whole-genome sample was completely unmapped. When we combined the two samples, we didn't even look at MIDI, because there was nothing in the NS5b region of the whole-genome sample.

A good MIDI section should be reported, even if there is nothing to match it in the whole-genome sample.

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