Install mafft and blast in GitHub Actions, for #10.

cfe-lab · Jul 21, 2023 · 1d54987 · 1d54987
1 parent 55536fb
commit 1d54987
Showing 1 changed file with 1 addition and 0 deletions.
diff --git a/.github/workflows/python-app.yml b/.github/workflows/python-app.yml
@@ -24,6 +24,7 @@ jobs:
         echo /opt/minimap2-2.17_x64-linux >> $GITHUB_PATH
     - name: Install dependencies
       run: |
+        sudo apt install -qq mafft ncbi-blast+
         python -m pip install --upgrade pip pipenv
         pipenv install --dev
     - name: Test with pytest