AUTHOR: Rupert Mathwin, Matt S. Gibbs and Corey J. A. Bradshaw
CONTACT: rupert.mathwin.ecology@gmail.com
URL: http://GlobalEcologyFlinders.com
INSTITUTION: Flinders University; Rupert Mathwin Ecology
RELEASE DATE: September 2022
R code accompanies article:
Mathwin, R, Wassens, S, Gibbs, MS, Young, J, Ye, Q, Saltré, F, and Bradshaw, CJA. 2022. Modelling the effects of water regulation on the population viability of threatened apmphibians. Ecosphere e4379. doi:10.1002/ecs2.4379
AIM: Stochastic population model of the population viability of Litoria raniformis at wetlands of four size classes at sill heights of 7 to 11 metres mAHD under natural and regulated flow between Locks 3 and 2 in southern Australia's Murray-Darling Basin.
Repository includes the following files:
- 'matrixOperators.R' — functions to manipulate matrix models
- 'Aspatial_Lraniformis_V10.R' — R code to run all population models
- 'Aspatial_Lraniformis_V10_global sensitivity_LHCandBRT.R' — R code to run global sensitivity analysis on the apsatial Lraniformis models
- 'CompHeightL3.csv' — wetland inundation records used to construct Markov-chains for stochastic resampling of inundation regimes
- 'ratingCurve.csv' — The known depth:flow ratio immediately downstream of the river height logger which informs the conversion of modelled natural flow to river height