GitHub - comprna/Junckey: Collection of scripts for computing PSI of junction clusters

comprna / Junckey Public

Collection of scripts for computing PSI of junction clusters

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Name		Name	Last commit message	Last commit date
Latest commit History 99 Commits
aux_scripts		aux_scripts
Extract_gene_coordinates.py		Extract_gene_coordinates.py
File_splitter.py		File_splitter.py
Format_genotype_v5.py		Format_genotype_v5.py
Generate_junction_BEDTracks.py		Generate_junction_BEDTracks.py
GenestoJunctions.R		GenestoJunctions.R
GenestoJunctions.py		GenestoJunctions.py
GenestoJunctions_v2.R		GenestoJunctions_v2.R
Get_PSI.py		Get_PSI.py
Get_length_clusters.py		Get_length_clusters.py
Methods.odt		Methods.odt
README.md		README.md
STARtoBED.R		STARtoBED.R
Split_in_juncfiles.py		Split_in_juncfiles.py
change_gtf.py		change_gtf.py
change_gtf.sh		change_gtf.sh
fix_coordinates.py		fix_coordinates.py
format_Log_STAR.R		format_Log_STAR.R
format_STAR_output.sh		format_STAR_output.sh
format_STAR_output_per_sample.sh		format_STAR_output_per_sample.sh
format_STAR_output_per_sample.sh~		format_STAR_output_per_sample.sh~
format_STAR_output_per_sample_slurm.sh		format_STAR_output_per_sample_slurm.sh
format_STAR_output_pipeline_cluster_part1.sh

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