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add correct tagged version for random model analysis link
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bblodfon committed Aug 8, 2020
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2 changes: 1 addition & 1 deletion cascade/random-model-ss/index.Rmd
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Expand Up @@ -15,7 +15,7 @@ site: bookdown::bookdown_site
Main question: is there a relation between *random* models **stable state number** and their **performance** as measured by AUC PR (Precision-Recall) or AUC ROC (Receiver Operatoring Characteristic)?
:::

This investigation can be considered as an extension of the random model ROC and PR curves (for CASCADE 2.0, link operator mutations) I created for the AGS paper I (see [here](https://bblodfon.github.io/ags-paper-1/index.html)).
This investigation can be considered as an extension of the random model ROC and PR curves (for CASCADE 2.0, link operator mutations) I created for the AGS paper I (see version tagged `v1.0` which included the abmlog-generated random model analysis [here](https://github.com/bblodfon/ags-paper-1/releases/tag/v1.0)).
In that analysis, I generated a $3000$ random model sample, and took only the models that had 1 stable state to compute their ROC performance.
So maybe I neede to generate more models or bootstrap (re-sample) these models to get a better picture of what is going on and that's what I am trying to do here :)

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4 changes: 2 additions & 2 deletions docs/cascade/random-model-ss/index.md
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@@ -1,7 +1,7 @@
---
title: "Random model predictions (CASCADE 2.0) vs Number of Stable States"
author: "[John Zobolas](https://github.com/bblodfon)"
date: "Last updated: 07 July, 2020"
date: "Last updated: 08 August, 2020"
description: "An investigation"
url: 'https\://bblodfon.github.io/gitsbe-model-analysis/cascade/random-model-ss/index.html'
github-repo: "bblodfon/gitsbe-model-analysis"
Expand All @@ -15,7 +15,7 @@ site: bookdown::bookdown_site
Main question: is there a relation between *random* models **stable state number** and their **performance** as measured by AUC PR (Precision-Recall) or AUC ROC (Receiver Operatoring Characteristic)?
:::

This investigation can be considered as an extension of the random model ROC and PR curves (for CASCADE 2.0, link operator mutations) I created for the AGS paper I (see [here](https://bblodfon.github.io/ags-paper-1/index.html)).
This investigation can be considered as an extension of the random model ROC and PR curves (for CASCADE 2.0, link operator mutations) I created for the AGS paper I (see version tagged `v1.0` which included the abmlog-generated random model analysis [here](https://github.com/bblodfon/ags-paper-1/releases/tag/v1.0)).
In that analysis, I generated a $3000$ random model sample, and took only the models that had 1 stable state to compute their ROC performance.
So maybe I neede to generate more models or bootstrap (re-sample) these models to get a better picture of what is going on and that's what I am trying to do here :)

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4 changes: 2 additions & 2 deletions docs/cascade/random-model-ss/main.html
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Expand Up @@ -891,14 +891,14 @@ <h1>
<div id="header">
<h1 class="title">Random model predictions (CASCADE 2.0) vs Number of Stable States</h1>
<p class="author"><em><a href="https://github.com/bblodfon">John Zobolas</a></em></p>
<p class="date"><em>Last updated: 07 July, 2020</em></p>
<p class="date"><em>Last updated: 08 August, 2020</em></p>
</div>
<div id="intro" class="section level1 unnumbered" number="">
<h1>Intro</h1>
<div class="green-box">
<p>Main question: is there a relation between <em>random</em> models <strong>stable state number</strong> and their <strong>performance</strong> as measured by AUC PR (Precision-Recall) or AUC ROC (Receiver Operatoring Characteristic)?</p>
</div>
<p>This investigation can be considered as an extension of the random model ROC and PR curves (for CASCADE 2.0, link operator mutations) I created for the AGS paper I (see <a href="https://bblodfon.github.io/ags-paper-1/index.html">here</a>).
<p>This investigation can be considered as an extension of the random model ROC and PR curves (for CASCADE 2.0, link operator mutations) I created for the AGS paper I (see version tagged <code>v1.0</code> which included the abmlog-generated random model analysis <a href="https://github.com/bblodfon/ags-paper-1/releases/tag/v1.0">here</a>).
In that analysis, I generated a <span class="math inline">\(3000\)</span> random model sample, and took only the models that had 1 stable state to compute their ROC performance.
So maybe I neede to generate more models or bootstrap (re-sample) these models to get a better picture of what is going on and that’s what I am trying to do here :)</p>
</div>
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