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Release version 3.1.2 #149

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Aug 8, 2024
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Release version 3.1.2 #149

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a997024
Version 3.1.2
j-i-l Aug 7, 2024
f91b253
cleaning up changelog
j-i-l Aug 7, 2024
f14f472
adding INLA repo also for CRAN
j-i-l Aug 7, 2024
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4 changes: 2 additions & 2 deletions DESCRIPTION
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Package: abn
Title: Modelling Multivariate Data with Additive Bayesian Networks
Version: 3.1.1
Date: 2024-05-22
Version: 3.1.2
Date: 2024-08-07
Authors@R: c(
person("Matteo", "Delucchi", , "matteo.delucchi@math.uzh.ch", role = c("aut", "cre"),
comment = c(ORCID = "0000-0002-9327-1496")),
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11 changes: 11 additions & 0 deletions NEWS.md
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# abn 3.1.2
[diff](https://github.com/furrer-lab/abn/compare/3.1.1...3.1.2)

> 2024-08-07

### Fix

* Simplified installation process ([#143](https://github.com/furrer-lab/abn/issues/143), [#142](https://github.com/furrer-lab/abn/issues/142), [#141](https://github.com/furrer-lab/abn/issues/141), [#125](https://github.com/furrer-lab/abn/issues/125), [#124](https://github.com/furrer-lab/abn/issues/124), [#123](https://github.com/furrer-lab/abn/issues/123), [#117](https://github.com/furrer-lab/abn/issues/117), [#114](https://github.com/furrer-lab/abn/issues/114))
* Minor fixes in JOSS paper ([#147](https://github.com/furrer-lab/abn/issues/147), [#129](https://github.com/furrer-lab/abn/issues/129))
* Some fixes and improvements in automation pipelines ([#140](https://github.com/furrer-lab/abn/issues/140), [#138](https://github.com/furrer-lab/abn/issues/138), [#132](https://github.com/furrer-lab/abn/issues/132), [#127](https://github.com/furrer-lab/abn/issues/127), [#111](https://github.com/furrer-lab/abn/issues/111))

# abn 3.1.1
[diff](https://github.com/furrer-lab/abn/compare/3.1.0...3.1.1)

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8 changes: 5 additions & 3 deletions README.md
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<!-- WARNING: -->
<!-- The ?branch=release-x.y.y is updated automatically by the initiate_version_release workflow -->
[![status](https://joss.theoj.org/papers/1bbc43a2be86f5d3f831cedb5cf81812/status.svg)](https://joss.theoj.org/papers/1bbc43a2be86f5d3f831cedb5cf81812)
[![On Label CRAN Checks](https://github.com/furrer-lab/abn/actions/workflows/onlabel_CRAN_checks.yml/badge.svg?branch=release-3.1.1)](https://github.com/furrer-lab/abn/actions/workflows/onlabel_CRAN_checks.yml)
[![On Label CRAN Checks](https://github.com/furrer-lab/abn/actions/workflows/onlabel_CRAN_checks.yml/badge.svg?branch=release-3.1.2)](https://github.com/furrer-lab/abn/actions/workflows/onlabel_CRAN_checks.yml)
[![Codecov](https://img.shields.io/codecov/c/github/furrer-lab/abn)](https://app.codecov.io/gh/furrer-lab/abn)
[![GitHub R package version](https://img.shields.io/github/r-package/v/furrer-lab/abn)](https://github.com/furrer-lab/abn/tags)
![cran](https://www.r-pkg.org/badges/version-ago/abn)
Expand Down Expand Up @@ -315,7 +315,7 @@ install.packages('pak', repos=c(CRAN="https://cran.r-project.org"))
To install `abn` run in your R session:

```R
pak::repo_add(INLA = "https://inla.r-inla-download.org/R/stable/")
pak::repo_add(INLA = "https://inla.r-inla-download.org/R/stable/")
pak::pkg_install("furrer-lab/abn@3.1.1", dependencies=TRUE)
```
_**Note:** The first command can be skipped on MacOS or Windows._
Expand All @@ -329,8 +329,10 @@ _**Note:** The first command can be skipped on MacOS or Windows._
In order to install the `abn` version on CRAN, open an R session and type:

```R
pak::repo_add(INLA = "https://inla.r-inla-download.org/R/stable/")
pak::pkg_install("abn", dependencies=TRUE)
```
_**Note:** The first command can be skipped on MacOS or Windows._

`abn` has several dependencies that are not available on CRAN.
This is why we rely on [pak](https://pak.r-lib.org/) for the installation and the [Prior to installing](#prior-to-installing) section should be followed through before installing `abn` from CRAN. [^1]
Expand Down Expand Up @@ -366,7 +368,7 @@ Installing from source is done with the following steps:
3. Build and install the local content with dependencies:

```R
pak::repo_add(INLA = "https://inla.r-inla-download.org/R/stable/")
pak::repo_add(INLA = "https://inla.r-inla-download.org/R/stable/")
pak::local_install(dependencies=TRUE)
```
_**Note:** The first command can be skipped on MacOS or Windows._
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