Merge pull request kubernetes#837 from derekwaynecarr/hugepages

Automatic merge from submit-queue

HugePages proposal

A pod may request a number of huge pages.  The `scheduler` is able to place the pod on a node that can satisfy that request.  The `kubelet` advertises an allocatable number of huge pages to support scheduling decisions. A pod may consume hugepages via `hugetlbfs` or `shmget`.  

Planned as Alpha for Kubernetes 1.8 release.

See feature: kubernetes#275

@kubernetes/sig-scheduling-feature-requests
@kubernetes/sig-scheduling-misc
@kubernetes/sig-node-proposals
@kubernetes/api-approvers
@kubernetes/api-reviewers

hugepages.md

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+# HugePages support in Kubernetes
+
+**Authors**
+* Derek Carr (@derekwaynecarr)
+* Seth Jennings (@sjenning)
+* Piotr Prokop (@PiotrProkop)
+
+**Status**: In progress
+
+## Abstract
+
+A proposal to enable applications running in a Kubernetes cluster to use huge
+pages.
+
+A pod may request a number of huge pages.  The `scheduler` is able to place the
+pod on a node that can satisfy that request.  The `kubelet` advertises an
+allocatable number of huge pages to support scheduling decisions. A pod may
+consume hugepages via `hugetlbfs` or `shmget`.  Huge pages are not
+overcommitted.
+
+## Motivation
+
+Memory is managed in blocks known as pages.  On most systems, a page is 4Ki. 1Mi
+of memory is equal to 256 pages; 1Gi of memory is 256,000 pages, etc. CPUs have
+a built-in memory management unit that manages a list of these pages in
+hardware. The Translation Lookaside Buffer (TLB) is a small hardware cache of
+virtual-to-physical page mappings.  If the virtual address passed in a hardware
+instruction can be found in the TLB, the mapping can be determined quickly.  If
+not, a TLB miss occurs, and the system falls back to slower, software based
+address translation.  This results in performance issues.  Since the size of the
+TLB is fixed, the only way to reduce the chance of a TLB miss is to increase the
+page size.
+
+A huge page is a memory page that is larger than 4Ki.  On x86_64 architectures,
+there are two common huge page sizes: 2Mi and 1Gi.  Sizes vary on other
+architectures, but the idea is the same.  In order to use huge pages,
+application must write code that is aware of them.  Transparent huge pages (THP)
+attempts to automate the management of huge pages without application knowledge,
+but they have limitations.  In particular, they are limited to 2Mi page sizes.
+THP might lead to performance degradation on nodes with high memory utilization
+or fragmentation due to defragmenting efforts of THP, which can lock memory
+pages. For this reason, some applications may be designed to (or recommend)
+usage of pre-allocated huge pages instead of THP.
+
+Managing memory is hard, and unfortunately, there is no one-size fits all
+solution for all applications.
+
+## Scope
+
+This proposal only includes pre-allocated huge pages configured on the node by
+the administrator at boot time or by manual dynamic allocation.  It does not
+discuss how the cluster could dynamically attempt to allocate huge pages in an
+attempt to find a fit for a pod pending scheduling.  It is anticipated that
+operators may use a variety of strategies to allocate huge pages, but we do not
+anticipate the kubelet itself doing the allocation.  Allocation of huge pages
+ideally happens soon after boot time.
+
+This proposal defers issues relating to NUMA.
+
+## Use Cases
+
+The class of applications that benefit from huge pages typically have
+- A large memory working set
+- A sensitivity to memory access latency
+
+Example applications include:
+- database management systems (MySQL, PostgreSQL, MongoDB, Oracle, etc.)
+- Java applications can back the heap with huge pages using the
+  `-XX:+UseLargePages` and `-XX:LagePageSizeInBytes` options.
+- packet processing systems (DPDK)
+
+Applications can generally use huge pages by calling
+- `mmap()` with `MAP_ANONYMOUS | MAP_HUGETLB` and use it as anonymous memory
+- `mmap()` a file backed by `hugetlbfs`
+- `shmget()` with `SHM_HUGETLB` and use it as a shared memory segment (see Known
+  Issues).
+
+1. A pod can use huge pages with any of the prior described methods.
+1. A pod can request huge pages.
+1. A scheduler can bind pods to nodes that have available huge pages.
+1. A quota may limit usage of huge pages.
+1. A limit range may constrain min and max huge page requests.
+
+## Feature Gate
+
+The proposal introduces huge pages as an Alpha feature.
+
+It must be enabled via the `--feature-gates=HugePages=true` flag on pertinent
+components pending graduation to Beta.
+
+## Node Specfication
+
+Huge pages cannot be overcommitted on a node.
+
+A system may support multiple huge page sizes.  It is assumed that most nodes
+will be configured to primarily use the default huge page size as returned via
+`grep Hugepagesize /proc/meminfo`.  This defaults to 2Mi on most Linux systems
+unless overriden by `default_hugepagesz=1g` in kernel boot parameters.  
+
+For each supported huge page size, the node will advertise a resource of the
+form `hugepages-<hugepagesize>`.  On Linux, supported huge page sizes are
+determined by parsing the `/sys/kernel/mm/hugepages/hugepages-{size}kB`
+directory on the host. Kubernetes will expose a `hugepages-<hugepagesize>`
+resource using binary notation form. It will convert `<hugepagesize>` into the
+most compact binary notation using integer values.  For example, if a node
+supports `hugepages-2048kB`, a resource `hugepages-2Mi` will be shown in node
+capacity and allocatable values. Operators may set aside pre-allocated huge
+pages that are not available for user pods similar to normal memory via the
+`--system-reserved` flag.
+
+There are a variety of huge page sizes supported across different hardware
+architectures.  It is preferred to have a resource per size in order to better
+support quota.  For example, 1 huge page with size 2Mi is orders of magnitude
+different than 1 huge page with size 1Gi.  We assume gigantic pages are even
+more precious resources than huge pages.
+
+Pre-allocated huge pages reduce the amount of allocatable memory on a node. The
+node will treat pre-allocated huge pages similar to other system reservations
+and reduce the amount of `memory` it reports using the following formula:
+
+```
+[Allocatable] = [Node Capacity] - 
+ [Kube-Reserved] - 
+ [System-Reserved] - 
+ [Pre-Allocated-HugePages * HugePageSize] -
+ [Hard-Eviction-Threshold]
+```
+
+The following represents a machine with 10Gi of memory.  1Gi of memory has been
+reserved as 512 pre-allocated huge pages sized 2Mi.  As you can see, the
+allocatable memory has been reduced to account for the amount of huge pages
+reserved.
+
+```
+apiVersion: v1
+kind: Node
+metadata:
+  name: node1
+...
+status:
+  capacity:
+    memory: 10Gi
+    hugepages-2Mi: 1Gi
+  allocatable:
+    memory: 9Gi
+    hugepages-2Mi: 1Gi
+...  
+```
+
+## Pod Specification
+
+A pod must make a request to consume pre-allocated huge pages using the resource
+`hugepages-<hugepagesize>` whose quantity is a positive amount of memory in
+bytes.  The specified amount must align with the `<hugepagesize>`; otherwise,
+the pod will fail validation.  For example, it would be valid to request
+`hugepages-2Mi: 4Mi`, but invalid to request `hugepages-2Mi: 3Mi`.
+
+The request and limit for `hugepages-<hugepagesize>` must match.  Similar to
+memory, an application that requests `hugepages-<hugepagesize>` resource is at
+minimum in the `Burstable` QoS class.
+
+If a pod consumes huge pages via `shmget`, it must run with a supplemental group
+that matches `/proc/sys/vm/hugetlb_shm_group` on the node.  Configuration of
+this group is outside the scope of this specification.
+
+Initially, a pod may not consume multiple huge page sizes in a single pod spec.
+Attempting to use `hugepages-2Mi` and `hugepages-1Gi` in the same pod spec will
+fail validation.  We believe it is rare for applications to attempt to use
+multiple huge page sizes. This restriction may be lifted in the future with
+community presented use cases.  Introducing the feature with this restriction
+limits the exposure of API changes needed when consuming huge pages via volumes.
+
+In order to consume huge pages backed by the `hugetlbfs` filesystem inside the
+specified container in the pod, it is helpful to understand the set of mount
+options used with `hugetlbfs`.  For more details, see "Using Huge Pages" here:
+https://www.kernel.org/doc/Documentation/vm/hugetlbpage.txt
+
+```
+mount -t hugetlbfs \
+	-o uid=<value>,gid=<value>,mode=<value>,pagesize=<value>,size=<value>,\
+	min_size=<value>,nr_inodes=<value> none /mnt/huge
+```
+
+The proposal recommends extending the existing `EmptyDirVolumeSource` to satisfy
+this use case.  A new `medium=HugePages` option would be supported.  To write
+into this volume, the pod must make a request for huge pages. The `pagesize`
+argument is inferred from the `hugepages-<hugepagesize>` from the resource
+request.  If in the future, multiple huge page sizes are supported in a single
+pod spec, we may modify the `EmptyDirVolumeSource` to provide an optional page
+size.  The existing `sizeLimit` option for `emptyDir` would restrict usage to
+the minimum value specified between `sizeLimit` and the sum of huge page limits
+of all containers in a pod. This keeps the behavior consistent with memory
+backed `emptyDir` volumes whose usage is ultimately constrained by the pod
+cgroup sandbox memory settings.  The `min_size` option is omitted as its not
+necessary.  The `nr_inodes` mount option is omitted at this time in the same
+manner it is omitted with `medium=Memory` when using `tmpfs`.
+
+The following is a sample pod that is limited to 1Gi huge pages of size 2Mi. It
+can consume those pages using `shmget()` or via `mmap()` with the specified
+volume.
+
+```
+apiVersion: v1
+kind: Pod
+metadata:
+  name: example
+spec:
+  containers:
+...
+    volumeMounts:
+    - mountPath: /hugepages
+      name: hugepage
+    resources:
+      requests:
+        hugepages-2Mi: 1Gi
+      limits:
+        hugepages-2Mi: 1Gi
+  volumes:
+  - name: hugepage
+    emptyDir:
+      medium: HugePages
+```
+
+## CRI Updates
+
+The `LinuxContainerResources` message should be extended to support specifying
+huge page limits per size.  The specification for huge pages should align with
+opencontainers/runtime-spec.
+
+see:
+https://github.com/opencontainers/runtime-spec/blob/master/config-linux.md#huge-page-limits
+
+The CRI changes are required before promoting this feature to Beta.
+
+## Cgroup Enforcement
+
+To use this feature, the `--cgroups-per-qos` must be enabled.  In addition, the
+`hugetlb` cgroup must be mounted.
+
+The `kubepods` cgroup is bounded by the `Allocatable` value.
+
+The QoS level cgroups are left unbounded across all huge page pool sizes.
+
+The pod level cgroup sandbox is configured as follows, where `hugepagesize` is
+the system supported huge page size(s).  If no request is made for huge pages of
+a particular size, the limit is set to 0 for all supported types on the node.
+
+```
+pod<UID>/hugetlb.<hugepagesize>.limit_in_bytes = sum(pod.spec.containers.resources.limits[hugepages-<hugepagesize>])
+```
+
+If the container runtime supports specification of huge page limits, the
+container cgroup sandbox will be configured with the specified limit.
+
+The `kubelet` will ensure the `hugetlb` has no usage charged to the pod level
+cgroup sandbox prior to deleting the pod to ensure all resources are reclaimed.
+
+## Limits and Quota
+
+The `ResourceQuota` resource will be extended to support accounting for
+`hugepages-<hugepagesize>` similar to `cpu` and `memory`.  The `LimitRange`
+resource will be extended to define min and max constraints for `hugepages`
+similar to `cpu` and `memory`.
+
+## Scheduler changes
+
+The scheduler will need to ensure any huge page request defined in the pod spec
+can be fulfilled by a candidate node.
+
+## cAdvisor changes
+
+cAdvisor will need to be modified to return the number of pre-allocated huge
+pages per page size on the node.  It will be used to determine capacity and
+calculate allocatable values on the node.
+
+## Roadmap
+
+### Version 1.8
+
+Initial alpha support for huge pages usage by pods.
+
+### Version 1.9
+
+Resource Quota support. Limit Range support. Beta support for huge pages
+(pending community feedback)
+
+## Known Issues
+
+### Huge pages as shared memory
+
+For the Java use case, the JVM maps the huge pages as a shared memory segment
+and memlocks them to prevent the system from moving or swapping them out.
+
+There are several issues here:
+- The user running the Java app must be a member of the gid set in the
+  `vm.huge_tlb_shm_group` sysctl
+- sysctl `kernel.shmmax` must allow the size of the shared memory segment
+- The user's memlock ulimits must allow the size of the shared memory segment
+- `vm.huge_tlb_shm_group` is not namespaced.
+
+### NUMA
+
+NUMA is complicated.  To support NUMA, the node must support cpu pinning,
+devices, and memory locality.  Extending that requirement to huge pages is not
+much different.  It is anticipated that the `kubelet` will provide future NUMA
+locality guarantees as a feature of QoS.  In particular, pods in the
+`Guaranteed` QoS class are expected to have NUMA locality preferences.
+