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Update scvelo to 0.3.2 #71

Merged
merged 23 commits into from
May 30, 2024
Merged

Update scvelo to 0.3.2 #71

merged 23 commits into from
May 30, 2024

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kevinrue
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@csoneson
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In case it may be useful, I tried to generate package lists for different platforms here: https://github.com/csoneson/velociraptor_package_list/actions/runs/9196811517. So far only the macOS ones are actually working...I also get slightly different environments for the Intel and M1 macs:

> setdiff(maclatest, mac12)
[1] "jupyter_core==5.7.2" "nomkl==1.0"         
> setdiff(mac12, maclatest)
[1] "jupyter_core==5.7.1" "mkl==2023.2.0"      

@kevinrue
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Can be useful. Haven't tried Intel mac yet, but test the environment may not be enough, a couple of issues I ran into only revealed themselves halfway through running scvelo on actual test data, not just loading the package, e.g. OpenTalker/video-retalking#35 (comment)

@kevinrue kevinrue changed the title Update scvelo to 0.2.5 Update scvelo to 0.3.2 May 24, 2024
@kevinrue
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Who wants to take this branch for a spin to double check before I merge?

I've got it to work on macOS arm M1, Linux, and Windows.

Note that I've updated scVelo to v0.3.2 on macOS and linux, but only to v0.2.5 on Windows due to an impossible dependency on jaxlib after that (documented in the updated man page of scvelo())

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Some packages don't install through conda
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