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National Microbiome Data Collaborative

National Microbiome Data Collaborative

37 followers
https://microbiomedata.org/
support@microbiomedata.org

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nmdc-schema nmdc-schema Public

National Microbiome Data Collaborative (NMDC) unified data model

Python 27 8
NMDC_documentation NMDC_documentation Public

Document workflows, schemas, and portal

2 3

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Showing 10 of 76 repositories

nmdc_notebooks Public
Jupyter Notebooks demonstrating R and Python-based access to NMDC metadata and data

microbiomedata/nmdc_notebooks’s past year of commit activity

Jupyter Notebook 5 CC0-1.0 0 3 4 Updated Sep 19, 2024
nmdc-edge Public
Web-based interface to the NMDC EDGE platform

microbiomedata/nmdc-edge’s past year of commit activity

JavaScript 3 0 68 (1 issue needs help) 2 Updated Sep 19, 2024
metaT Public
Metatranscriptomics workflow

microbiomedata/metaT’s past year of commit activity

WDL 4 2 6 0 Updated Sep 19, 2024
issues Public
public repo for issues related to NMDC work

microbiomedata/issues’s past year of commit activity

Jupyter Notebook 1 0 323 1 Updated Sep 19, 2024
nmdc-runtime Public
Runtime system for NMDC data management and orchestration

microbiomedata/nmdc-runtime’s past year of commit activity

HTML 5 3 105 (6 issues need help) 10 Updated Sep 18, 2024
nmdc-server Public
Data portal client and server for NMDC.

microbiomedata/nmdc-server’s past year of commit activity

Python 8 0 164 16 Updated Sep 18, 2024
berkeley-schema-fy24 Public Forked from microbiomedata/nmdc-schema
A fork of the nmdc-schema, for refactoring based on Monterey insights

microbiomedata/berkeley-schema-fy24’s past year of commit activity

Python 6 CC0-1.0 8 0 9 Updated Sep 18, 2024
nmdc-schema Public
National Microbiome Data Collaborative (NMDC) unified data model

microbiomedata/nmdc-schema’s past year of commit activity

Python 27 CC0-1.0 8 367 (1 issue needs help) 27 Updated Sep 18, 2024
nmdc_automation Public
Prototype automation

microbiomedata/nmdc_automation’s past year of commit activity

Python 2 2 39 3 Updated Sep 17, 2024
nmdc-field-notes Public
Mobile app for metadata collection on the go

microbiomedata/nmdc-field-notes’s past year of commit activity

TypeScript 1 0 30 (2 issues need help) 0 Updated Sep 17, 2024

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nmdc linkml microbiomedata workflow samples

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