Fix: failed to checkout nextflow non-existing branch

mrtamm · Sep 11, 2024 · 31edfc2 · 31edfc2
1 parent 2939697
commit 31edfc2
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diff --git a/.github/workflows/nextflow.yaml b/.github/workflows/nextflow.yaml
@@ -40,7 +40,7 @@ jobs:
     - name: Install Nextflow
       run: |
         cd ..
-        git clone https://github.com/nextflow-io/nextflow/ -b tes-update-1.1
+        git clone https://github.com/nextflow-io/nextflow/ -b v24.04.4 --depth 1
         cd nextflow
         make compile
 

diff --git a/tests/funnel_utils.go b/tests/funnel_utils.go
@@ -376,6 +376,8 @@ func (f *Funnel) StartServerInDocker(containerName, imageName string, extraArgs
 	args = append(args, extraArgs...)
 	args = append(args, imageName, "funnel", "server", "run", "--config", "/opt/funnel_config.yml")
 
+	fmt.Println("DOCKER args:", strings.Join(args, " "))
+
 	cmd := exec.Command("docker", args...)
 	cmd.Stdout = os.Stdout
 	cmd.Stderr = os.Stderr