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Upgrade dependencies #2

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merged 3 commits into from
Sep 11, 2024
Merged

Upgrade dependencies #2

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3ddd708
Upgrade dependencies
mrtamm Sep 11, 2024
fe41c48
Fix Base64 test (due to dependency upgrades)
mrtamm Sep 11, 2024
65dab06
Update yarn.lock
mrtamm Sep 11, 2024
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159 changes: 81 additions & 78 deletions go.mod
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Original file line number Diff line number Diff line change
@@ -1,119 +1,121 @@
module github.com/ohsu-comp-bio/funnel

go 1.21
go 1.22.0

toolchain go1.21.13
toolchain go1.23.0

require (
cloud.google.com/go/datastore v1.15.0
cloud.google.com/go/pubsub v1.33.0
cloud.google.com/go/datastore v1.19.0
cloud.google.com/go/pubsub v1.43.0
github.com/Microsoft/go-winio v0.6.1 // indirect
github.com/alecthomas/units v0.0.0-20211218093645-b94a6e3cc137
github.com/alecthomas/units v0.0.0-20240626203959-61d1e3462e30
github.com/andreyvit/diff v0.0.0-20170406064948-c7f18ee00883
github.com/armon/circbuf v0.0.0-20190214190532-5111143e8da2
github.com/aws/aws-sdk-go v1.44.314
github.com/aws/aws-sdk-go v1.55.5
github.com/boltdb/bolt v1.3.1
github.com/cenkalti/backoff v2.2.1+incompatible
github.com/dgraph-io/badger/v2 v2.0.1
github.com/dgraph-io/badger/v2 v2.2007.4
github.com/dgryski/go-farm v0.0.0-20200201041132-a6ae2369ad13 // indirect
github.com/docker/distribution v2.8.2+incompatible // indirect
github.com/docker/docker v24.0.7+incompatible
github.com/docker/go-connections v0.4.0 // indirect
github.com/docker/go-units v0.5.0 // indirect
github.com/elazarl/go-bindata-assetfs v1.0.0
github.com/gammazero/workerpool v0.0.0-20200206003619-019d125201ab
github.com/elazarl/go-bindata-assetfs v1.0.1
github.com/gammazero/workerpool v1.1.3
github.com/getkin/kin-openapi v0.98.0
github.com/getlantern/deepcopy v0.0.0-20160317154340-7f45deb8130a
github.com/ghodss/yaml v1.0.0
github.com/gizak/termui v2.3.0+incompatible
github.com/go-ini/ini v1.52.0 // indirect
github.com/go-ole/go-ole v1.2.6 // indirect
github.com/go-ini/ini v1.67.0 // indirect
github.com/go-ole/go-ole v1.3.0 // indirect
github.com/go-test/deep v1.0.5
github.com/golang/gddo v0.0.0-20200219175727-df439dd5819e
github.com/golang/gddo v0.0.0-20210115222349-20d68f94ee1f
github.com/golang/protobuf v1.5.4 // indirect
github.com/grpc-ecosystem/go-grpc-middleware v1.2.0
github.com/imdario/mergo v0.3.8
github.com/jlaffaye/ftp v0.0.0-20191218041957-e1b8fdd0dcc3
github.com/grpc-ecosystem/go-grpc-middleware v1.4.0
github.com/imdario/mergo v0.3.16
github.com/jlaffaye/ftp v0.2.0
github.com/kballard/go-shellquote v0.0.0-20180428030007-95032a82bc51
github.com/kr/pretty v0.3.1
github.com/logrusorgru/aurora v0.0.0-20200102142835-e9ef32dff381
github.com/logrusorgru/aurora v2.0.3+incompatible
github.com/minio/minio-go v6.0.14+incompatible
github.com/mitchellh/go-wordwrap v1.0.1 // indirect
github.com/moby/term v0.5.0 // indirect
github.com/morikuni/aec v1.0.0 // indirect
github.com/ncw/swift v1.0.50
github.com/ncw/swift v1.0.53
github.com/nu7hatch/gouuid v0.0.0-20131221200532-179d4d0c4d8d
github.com/prometheus/client_golang v1.15.1
github.com/prometheus/common v0.42.0
github.com/rs/xid v1.5.0
github.com/prometheus/client_golang v1.20.3
github.com/prometheus/common v0.59.1
github.com/rs/xid v1.6.0
github.com/sirupsen/logrus v1.9.3
github.com/spf13/cobra v1.8.0
github.com/spf13/cobra v1.8.1
github.com/spf13/pflag v1.0.5
github.com/stretchr/testify v1.9.0
go.mongodb.org/mongo-driver v1.12.1
golang.org/x/crypto v0.26.0
golang.org/x/net v0.28.0
golang.org/x/oauth2 v0.20.0
golang.org/x/time v0.3.0
google.golang.org/api v0.149.0
google.golang.org/genproto v0.0.0-20240116215550-a9fa1716bcac // indirect
google.golang.org/grpc v1.65.0
gopkg.in/ini.v1 v1.67.0 // indirect
gopkg.in/olivere/elastic.v5 v5.0.84
k8s.io/api v0.28.0-alpha.2
k8s.io/apimachinery v0.28.2
k8s.io/client-go v0.28.0-alpha.2
go.mongodb.org/mongo-driver v1.16.1
golang.org/x/crypto v0.27.0
golang.org/x/net v0.29.0
golang.org/x/oauth2 v0.23.0
golang.org/x/time v0.6.0
google.golang.org/api v0.197.0
google.golang.org/genproto v0.0.0-20240903143218-8af14fe29dc1 // indirect
google.golang.org/grpc v1.66.1
gopkg.in/olivere/elastic.v5 v5.0.86
k8s.io/api v0.31.0
k8s.io/apimachinery v0.31.0
k8s.io/client-go v0.31.0
)

require (
github.com/IBM/sarama v1.43.3
github.com/grpc-ecosystem/grpc-gateway/v2 v2.19.1
github.com/grpc-ecosystem/grpc-gateway/v2 v2.22.0
github.com/hashicorp/go-multierror v1.1.1
github.com/lestrrat-go/jwx/v2 v2.1.1
github.com/shirou/gopsutil/v3 v3.24.5
golang.org/x/term v0.23.0
google.golang.org/genproto/googleapis/api v0.0.0-20240528184218-531527333157
golang.org/x/term v0.24.0
google.golang.org/genproto/googleapis/api v0.0.0-20240903143218-8af14fe29dc1
google.golang.org/grpc/cmd/protoc-gen-go-grpc v1.5.1
google.golang.org/protobuf v1.34.1
google.golang.org/protobuf v1.34.2
)

require (
cloud.google.com/go v0.111.0 // indirect
cloud.google.com/go/compute/metadata v0.3.0 // indirect
cloud.google.com/go/iam v1.1.5 // indirect
cloud.google.com/go v0.115.1 // indirect
cloud.google.com/go/auth v0.9.3 // indirect
cloud.google.com/go/auth/oauth2adapt v0.2.4 // indirect
cloud.google.com/go/compute/metadata v0.5.0 // indirect
cloud.google.com/go/iam v1.2.0 // indirect
github.com/Azure/go-ansiterm v0.0.0-20230124172434-306776ec8161 // indirect
github.com/DataDog/zstd v1.4.5 // indirect
github.com/OneOfOne/xxhash v1.2.8 // indirect
github.com/beorn7/perks v1.0.1 // indirect
github.com/cespare/xxhash v1.1.0 // indirect
github.com/cespare/xxhash/v2 v2.3.0 // indirect
github.com/cpuguy83/go-md2man/v2 v2.0.3 // indirect
github.com/cpuguy83/go-md2man/v2 v2.0.4 // indirect
github.com/davecgh/go-spew v1.1.2-0.20180830191138-d8f796af33cc // indirect
github.com/decred/dcrd/dcrec/secp256k1/v4 v4.3.0 // indirect
github.com/dgraph-io/ristretto v0.0.0-20191025175511-c1f00be0418e // indirect
github.com/dgraph-io/ristretto v0.1.1 // indirect
github.com/dustin/go-humanize v1.0.1 // indirect
github.com/eapache/go-resiliency v1.7.0 // indirect
github.com/eapache/go-xerial-snappy v0.0.0-20230731223053-c322873962e3 // indirect
github.com/eapache/queue v1.1.0 // indirect
github.com/emicklei/go-restful/v3 v3.9.0 // indirect
github.com/gammazero/deque v0.0.0-20190521012701-46e4ffb7a622 // indirect
github.com/go-bindata/go-bindata v3.1.2+incompatible // indirect
github.com/go-logr/logr v1.2.4 // indirect
github.com/emicklei/go-restful/v3 v3.12.1 // indirect
github.com/felixge/httpsnoop v1.0.4 // indirect
github.com/fxamacker/cbor/v2 v2.7.0 // indirect
github.com/gammazero/deque v0.2.1 // indirect
github.com/go-logr/logr v1.4.2 // indirect
github.com/go-logr/stdr v1.2.2 // indirect
github.com/go-openapi/jsonpointer v0.19.6 // indirect
github.com/go-openapi/jsonreference v0.20.2 // indirect
github.com/go-openapi/swag v0.22.4 // indirect
github.com/go-openapi/jsonpointer v0.21.0 // indirect
github.com/go-openapi/jsonreference v0.21.0 // indirect
github.com/go-openapi/swag v0.23.0 // indirect
github.com/goccy/go-json v0.10.3 // indirect
github.com/gogo/protobuf v1.3.2 // indirect
github.com/golang/glog v1.2.2 // indirect
github.com/golang/groupcache v0.0.0-20210331224755-41bb18bfe9da // indirect
github.com/golang/snappy v0.0.4 // indirect
github.com/google/gnostic-models v0.6.8 // indirect
github.com/google/go-cmp v0.6.0 // indirect
github.com/google/gofuzz v1.2.0 // indirect
github.com/google/s2a-go v0.1.7 // indirect
github.com/google/s2a-go v0.1.8 // indirect
github.com/google/uuid v1.6.0 // indirect
github.com/googleapis/enterprise-certificate-proxy v0.3.2 // indirect
github.com/googleapis/gax-go/v2 v2.12.0 // indirect
github.com/googleapis/enterprise-certificate-proxy v0.3.4 // indirect
github.com/googleapis/gax-go/v2 v2.13.0 // indirect
github.com/hashicorp/errwrap v1.1.0 // indirect
github.com/hashicorp/go-uuid v1.0.3 // indirect
github.com/inconshreveable/mousetrap v1.1.0 // indirect
Expand All @@ -133,60 +135,61 @@ require (
github.com/lestrrat-go/httprc v1.0.6 // indirect
github.com/lestrrat-go/iter v1.0.2 // indirect
github.com/lestrrat-go/option v1.0.1 // indirect
github.com/lufia/plan9stats v0.0.0-20211012122336-39d0f177ccd0 // indirect
github.com/lufia/plan9stats v0.0.0-20240909124753-873cd0166683 // indirect
github.com/mailru/easyjson v0.7.7 // indirect
github.com/maruel/panicparse v1.6.2 // indirect
github.com/mattn/go-runewidth v0.0.15 // indirect
github.com/matttproud/golang_protobuf_extensions v1.0.4 // indirect
github.com/mattn/go-runewidth v0.0.16 // indirect
github.com/mitchellh/go-homedir v1.1.0 // indirect
github.com/modern-go/concurrent v0.0.0-20180306012644-bacd9c7ef1dd // indirect
github.com/modern-go/reflect2 v1.0.2 // indirect
github.com/montanaflynn/stats v0.7.0 // indirect
github.com/montanaflynn/stats v0.7.1 // indirect
github.com/munnerz/goautoneg v0.0.0-20191010083416-a7dc8b61c822 // indirect
github.com/nsf/termbox-go v1.1.1 // indirect
github.com/opencontainers/go-digest v1.0.0 // indirect
github.com/opencontainers/image-spec v1.1.0-rc5 // indirect
github.com/pierrec/lz4/v4 v4.1.21 // indirect
github.com/pkg/errors v0.9.1 // indirect
github.com/pmezard/go-difflib v1.0.1-0.20181226105442-5d4384ee4fb2 // indirect
github.com/power-devops/perfstat v0.0.0-20210106213030-5aafc221ea8c // indirect
github.com/prometheus/client_model v0.4.0 // indirect
github.com/prometheus/procfs v0.9.0 // indirect
github.com/power-devops/perfstat v0.0.0-20240221224432-82ca36839d55 // indirect
github.com/prometheus/client_model v0.6.1 // indirect
github.com/prometheus/procfs v0.15.1 // indirect
github.com/rcrowley/go-metrics v0.0.0-20201227073835-cf1acfcdf475 // indirect
github.com/rivo/uniseg v0.4.2 // indirect
github.com/rogpeppe/go-internal v1.10.0 // indirect
github.com/rivo/uniseg v0.4.7 // indirect
github.com/rogpeppe/go-internal v1.12.0 // indirect
github.com/russross/blackfriday/v2 v2.1.0 // indirect
github.com/segmentio/asm v1.2.0 // indirect
github.com/sergi/go-diff v1.2.0 // indirect
github.com/shoenig/go-m1cpu v0.1.6 // indirect
github.com/smartystreets/goconvey v1.8.0 // indirect
github.com/stretchr/objx v0.5.2 // indirect
github.com/tklauser/go-sysconf v0.3.12 // indirect
github.com/tklauser/numcpus v0.6.1 // indirect
github.com/tklauser/go-sysconf v0.3.14 // indirect
github.com/tklauser/numcpus v0.8.0 // indirect
github.com/x448/float16 v0.8.4 // indirect
github.com/xdg-go/pbkdf2 v1.0.0 // indirect
github.com/xdg-go/scram v1.1.2 // indirect
github.com/xdg-go/stringprep v1.0.4 // indirect
github.com/youmark/pkcs8 v0.0.0-20181117223130-1be2e3e5546d // indirect
github.com/youmark/pkcs8 v0.0.0-20240726163527-a2c0da244d78 // indirect
github.com/yusufpapurcu/wmi v1.2.4 // indirect
go.opencensus.io v0.24.0 // indirect
go.opentelemetry.io/otel v1.19.0 // indirect
go.opentelemetry.io/otel/metric v1.19.0 // indirect
go.opentelemetry.io/otel/trace v1.19.0 // indirect
go.opentelemetry.io/contrib/instrumentation/google.golang.org/grpc/otelgrpc v0.54.0 // indirect
go.opentelemetry.io/contrib/instrumentation/net/http/otelhttp v0.54.0 // indirect
go.opentelemetry.io/otel v1.30.0 // indirect
go.opentelemetry.io/otel/metric v1.30.0 // indirect
go.opentelemetry.io/otel/trace v1.30.0 // indirect
golang.org/x/mod v0.20.0 // indirect
golang.org/x/sync v0.8.0 // indirect
golang.org/x/sys v0.23.0 // indirect
golang.org/x/text v0.17.0 // indirect
golang.org/x/sys v0.25.0 // indirect
golang.org/x/text v0.18.0 // indirect
golang.org/x/tools v0.24.0 // indirect
google.golang.org/genproto/googleapis/rpc v0.0.0-20240604185151-ef581f913117 // indirect
google.golang.org/genproto/googleapis/rpc v0.0.0-20240903143218-8af14fe29dc1 // indirect
gopkg.in/inf.v0 v0.9.1 // indirect
gopkg.in/yaml.v2 v2.4.0 // indirect
gopkg.in/yaml.v3 v3.0.1 // indirect
gotest.tools/v3 v3.4.0 // indirect
k8s.io/klog/v2 v2.100.1 // indirect
k8s.io/kube-openapi v0.0.0-20230717233707-2695361300d9 // indirect
k8s.io/utils v0.0.0-20230406110748-d93618cff8a2 // indirect
k8s.io/klog/v2 v2.130.1 // indirect
k8s.io/kube-openapi v0.0.0-20240903163716-9e1beecbcb38 // indirect
k8s.io/utils v0.0.0-20240902221715-702e33fdd3c3 // indirect
sigs.k8s.io/json v0.0.0-20221116044647-bc3834ca7abd // indirect
sigs.k8s.io/structured-merge-diff/v4 v4.2.3 // indirect
sigs.k8s.io/yaml v1.3.0 // indirect
sigs.k8s.io/structured-merge-diff/v4 v4.4.1 // indirect
sigs.k8s.io/yaml v1.4.0 // indirect

)
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