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@ohsu-comp-bio

Oregon Health and Science University Computational Biology

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  1. funnel funnel Public

    Funnel is a toolkit for distributed task execution via a simple, standard API.

    Go 120 32

  2. tesseract tesseract Public

    Python lib for remote code execution via the GA4GH TES API

    Python 6

  3. g2p-aggregator g2p-aggregator Public

    Associations of genomic features, drugs and diseases

    HTML 48 11

Repositories

Showing 10 of 196 repositories
  • funnel Public

    Funnel is a toolkit for distributed task execution via a simple, standard API.

    ohsu-comp-bio/funnel’s past year of commit activity
    Go 120 MIT 32 105 (1 issue needs help) 4 Updated Sep 17, 2024
  • homebrew-formula Public

    homebrew tap for OHSU Comp Bio tools

    ohsu-comp-bio/homebrew-formula’s past year of commit activity
    Ruby 1 MIT 1 0 2 Updated Sep 13, 2024
  • compbio-galaxy-wrappers Public

    OHSU Galaxy wrappers.

    ohsu-comp-bio/compbio-galaxy-wrappers’s past year of commit activity
    Python 6 11 0 4 Updated Sep 11, 2024
  • awesome-tes Public

    A curated list of awesome GA4GH TES projects and programs

    ohsu-comp-bio/awesome-tes’s past year of commit activity
    0 CC0-1.0 0 1 0 Updated Sep 10, 2024
  • vrs-annotator Public

    Annotates VCF Variants with VRS IDs

    ohsu-comp-bio/vrs-annotator’s past year of commit activity
    Jupyter Notebook 1 3 0 1 Updated Aug 30, 2024
  • idp-backups Public

    Steps for backing up, migrating, and restoring IDP data

    ohsu-comp-bio/idp-backups’s past year of commit activity
    0 Apache-2.0 0 0 0 Updated Aug 29, 2024
  • project-template Public template

    Example Repo Template for OHSU Comp Bio projects

    ohsu-comp-bio/project-template’s past year of commit activity
    0 Apache-2.0 0 0 0 Updated Aug 12, 2024
  • load-testing Public

    Browser load testing using k6s

    ohsu-comp-bio/load-testing’s past year of commit activity
    JavaScript 1 1 2 0 Updated Aug 12, 2024
  • fence-multipart Public Forked from uc-cdis/fence

    AuthN/AuthZ OIDC Service

    ohsu-comp-bio/fence-multipart’s past year of commit activity
    Python 0 Apache-2.0 48 0 0 Updated Aug 7, 2024
  • gatk4_xml_prepare Public

    Tools to auto-create XML files from GATK4 json descriptions.

    ohsu-comp-bio/gatk4_xml_prepare’s past year of commit activity
    Python 0 GPL-3.0 3 8 1 Updated Jul 30, 2024
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