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[BUG] Flaky org.opensearch.search.aggregations.metrics.CardinalityWithRequestBreakerIT test #10154

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ashking94 opened this issue Sep 21, 2023 · 14 comments · Fixed by #11841 or #11953
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bug Something isn't working flaky-test Random test failure that succeeds on second run untriaged v2.12.0 Issues and PRs related to version 2.12.0 v3.0.0 Issues and PRs related to version 3.0.0

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@ashking94
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Describe the bug
org.opensearch.search.aggregations.metrics.CardinalityWithRequestBreakerIT.testRequestBreaker is flaky.

To Reproduce
org.opensearch.search.aggregations.metrics.CardinalityWithRequestBreakerIT.testRequestBreaker {p0={"search.concurrent_segment_search.enabled":"true"}}
org.opensearch.search.aggregations.metrics.CardinalityWithRequestBreakerIT.testRequestBreaker {p0={"search.concurrent_segment_search.enabled":"false"}}

Expected behavior
Test should always pass.

Plugins
Please list all plugins currently enabled.

Screenshots
If applicable, add screenshots to help explain your problem.

Host/Environment (please complete the following information):

  • OS: [e.g. iOS]
  • Version [e.g. 22]

Additional context
CI - https://build.ci.opensearch.org/job/gradle-check/25992/

@ashking94 ashking94 added bug Something isn't working untriaged labels Sep 21, 2023
andrross added a commit to andrross/OpenSearch that referenced this issue Oct 19, 2023
Relates opensearch-project#10154

Signed-off-by: Andrew Ross <andrross@amazon.com>
andrross added a commit to andrross/OpenSearch that referenced this issue Oct 21, 2023
Relates opensearch-project#10154

Signed-off-by: Andrew Ross <andrross@amazon.com>
@shwetathareja
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#10777 (comment)

sohami pushed a commit that referenced this issue Nov 20, 2023
Relates #10154


(cherry picked from commit c676479)

Signed-off-by: Andrew Ross <andrross@amazon.com>
Signed-off-by: github-actions[bot] <github-actions[bot]@users.noreply.github.com>
Co-authored-by: github-actions[bot] <github-actions[bot]@users.noreply.github.com>
@sohami sohami removed their assignment Nov 21, 2023
fahadshamiinsta pushed a commit to fahadshamiinsta/OpenSearch270 that referenced this issue Dec 4, 2023
@neetikasinghal
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neetikasinghal commented Dec 7, 2023

On checking more, the Circuit Breaker for one of the threads is not getting reset back to zero. Following is the stacktrace:

[java.base/java.lang.Thread.getStackTrace(Thread.java:1602), org.opensearch.common.breaker.ChildMemoryCircuitBreaker.addWithoutBreaking(ChildMemoryCircuitBreaker.java:222), org.opensearch.common.util.BigArrays.adjustBreaker(BigArrays.java:481), org.opensearch.common.util.AbstractArray.close(AbstractArray.java:62), org.opensearch.common.util.io.IOUtils.close(IOUtils.java:89), org.opensearch.common.lease.Releasables.close(Releasables.java:70), org.opensearch.gateway.PersistedClusterStateService$DocumentBuffer.close(PersistedClusterStateService.java:999), org.opensearch.gateway.PersistedClusterStateService$Writer.updateMetadata(PersistedClusterStateService.java:793), org.opensearch.gateway.PersistedClusterStateService$Writer.writeIncrementalStateAndCommit(PersistedClusterStateService.java:690), org.opensearch.gateway.GatewayMetaState$LucenePersistedState.setLastAcceptedState(GatewayMetaState.java:609), org.opensearch.cluster.coordination.CoordinationState.handlePublishRequest(CoordinationState.java:452), org.opensearch.cluster.coordination.Coordinator.handlePublishRequest(Coordinator.java:451), org.opensearch.cluster.coordination.PublicationTransportHandler.acceptState(PublicationTransportHandler.java:224), org.opensearch.cluster.coordination.PublicationTransportHandler.handleIncomingPublishRequest(PublicationTransportHandler.java:206), org.opensearch.cluster.coordination.PublicationTransportHandler.lambda$new$0(PublicationTransportHandler.java:117), org.opensearch.transport.RequestHandlerRegistry.processMessageReceived(RequestHandlerRegistry.java:106), org.opensearch.transport.InboundHandler$RequestHandler.doRun(InboundHandler.java:480), org.opensearch.common.util.concurrent.ThreadContext$ContextPreservingAbstractRunnable.doRun(ThreadContext.java:911), org.opensearch.common.util.concurrent.AbstractRunnable.run(AbstractRunnable.java:52), java.base/java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1128), java.base/java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:628), java.base/java.lang.Thread.run(Thread.java:829)]

@neetikasinghal
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neetikasinghal commented Dec 29, 2023

Exception received on test failure is as follows:

The random seed to reproduce the test faster is -Dtests.seed=F3F7FF2B9B35932E

java.lang.AssertionError: Request breaker not reset to 0 on node: node_s0
Expected: <0L>
     but: was <6553888L>
	at __randomizedtesting.SeedInfo.seed([221689B6AE8054B1:9A44B4F6414086FB]:0)
	at org.hamcrest.MatcherAssert.assertThat(MatcherAssert.java:18)
	at org.junit.Assert.assertThat(Assert.java:964)
	at org.opensearch.test.InternalTestCluster.lambda$ensureEstimatedStats$42(InternalTestCluster.java:2691)
	at org.opensearch.test.OpenSearchTestCase.assertBusy(OpenSearchTestCase.java:1086)
	at org.opensearch.test.OpenSearchTestCase.assertBusy(OpenSearchTestCase.java:1059)
	at org.opensearch.test.InternalTestCluster.ensureEstimatedStats(InternalTestCluster.java:2689)
	at org.opensearch.test.TestCluster.assertAfterTest(TestCluster.java:104)
	at org.opensearch.test.InternalTestCluster.assertAfterTest(InternalTestCluster.java:2744)
	at org.opensearch.test.OpenSearchIntegTestCase.afterInternal(OpenSearchIntegTestCase.java:619)
	at org.opensearch.test.OpenSearchIntegTestCase.cleanUpCluster(OpenSearchIntegTestCase.java:2289)
	at java.base/jdk.internal.reflect.DirectMethodHandleAccessor.invoke(DirectMethodHandleAccessor.java:104)
	at java.base/java.lang.reflect.Method.invoke(Method.java:578)
	at com.carrotsearch.randomizedtesting.RandomizedRunner.invoke(RandomizedRunner.java:1750)
	at com.carrotsearch.randomizedtesting.RandomizedRunner$10.evaluate(RandomizedRunner.java:996)
	at com.carrotsearch.randomizedtesting.rules.StatementAdapter.evaluate(StatementAdapter.java:36)
	at org.junit.rules.RunRules.evaluate(RunRules.java:20)
	at org.apache.lucene.tests.util.TestRuleSetupTeardownChained$1.evaluate(TestRuleSetupTeardownChained.java:48)
	at org.apache.lucene.tests.util.AbstractBeforeAfterRule$1.evaluate(AbstractBeforeAfterRule.java:43)
	at org.apache.lucene.tests.util.TestRuleThreadAndTestName$1.evaluate(TestRuleThreadAndTestName.java:45)
	at org.apache.lucene.tests.util.TestRuleIgnoreAfterMaxFailures$1.evaluate(TestRuleIgnoreAfterMaxFailures.java:60)
	at org.apache.lucene.tests.util.TestRuleMarkFailure$1.evaluate(TestRuleMarkFailure.java:44)
	at org.junit.rules.RunRules.evaluate(RunRules.java:20)
	at com.carrotsearch.randomizedtesting.rules.StatementAdapter.evaluate(StatementAdapter.java:36)
	at com.carrotsearch.randomizedtesting.ThreadLeakControl$StatementRunner.run(ThreadLeakControl.java:368)
	at com.carrotsearch.randomizedtesting.ThreadLeakControl.forkTimeoutingTask(ThreadLeakControl.java:817)
	at com.carrotsearch.randomizedtesting.ThreadLeakControl$3.evaluate(ThreadLeakControl.java:468)
	at com.carrotsearch.randomizedtesting.RandomizedRunner.runSingleTest(RandomizedRunner.java:947)
	at com.carrotsearch.randomizedtesting.RandomizedRunner$5.evaluate(RandomizedRunner.java:832)
	at com.carrotsearch.randomizedtesting.RandomizedRunner$6.evaluate(RandomizedRunner.java:883)
	at com.carrotsearch.randomizedtesting.RandomizedRunner$7.evaluate(RandomizedRunner.java:894)
	at org.apache.lucene.tests.util.AbstractBeforeAfterRule$1.evaluate(AbstractBeforeAfterRule.java:43)
	at com.carrotsearch.randomizedtesting.rules.StatementAdapter.evaluate(StatementAdapter.java:36)
	at org.apache.lucene.tests.util.TestRuleStoreClassName$1.evaluate(TestRuleStoreClassName.java:38)
	at com.carrotsearch.randomizedtesting.rules.NoShadowingOrOverridesOnMethodsRule$1.evaluate(NoShadowingOrOverridesOnMethodsRule.java:40)
	at com.carrotsearch.randomizedtesting.rules.NoShadowingOrOverridesOnMethodsRule$1.evaluate(NoShadowingOrOverridesOnMethodsRule.java:40)
	at com.carrotsearch.randomizedtesting.rules.StatementAdapter.evaluate(StatementAdapter.java:36)
	at com.carrotsearch.randomizedtesting.rules.StatementAdapter.evaluate(StatementAdapter.java:36)
	at org.apache.lucene.tests.util.TestRuleAssertionsRequired$1.evaluate(TestRuleAssertionsRequired.java:53)
	at org.apache.lucene.tests.util.AbstractBeforeAfterRule$1.evaluate(AbstractBeforeAfterRule.java:43)
	at org.apache.lucene.tests.util.TestRuleMarkFailure$1.evaluate(TestRuleMarkFailure.java:44)
	at org.apache.lucene.tests.util.TestRuleIgnoreAfterMaxFailures$1.evaluate(TestRuleIgnoreAfterMaxFailures.java:60)
	at org.apache.lucene.tests.util.TestRuleIgnoreTestSuites$1.evaluate(TestRuleIgnoreTestSuites.java:47)
	at org.junit.rules.RunRules.evaluate(RunRules.java:20)
	at com.carrotsearch.randomizedtesting.rules.StatementAdapter.evaluate(StatementAdapter.java:36)
	at com.carrotsearch.randomizedtesting.ThreadLeakControl$StatementRunner.run(ThreadLeakControl.java:368)
	at java.base/java.lang.Thread.run(Thread.java:1623)
	Suppressed: java.lang.AssertionError: Request breaker not reset to 0 on node: node_s0

@neetikasinghal
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The test failure is received only in the case of concurrent search, the above exception hints to a memory leak happening in one of the threads. On looking deeper, following looks to be the problem leading to the memory leak:

The test CardinalityWithRequestBreakerIT.testRequestBreaker creates an index, adds multiple documents to the index, adds a Circuit Breaker Limit Setting and runs a search query with Terms aggregator and Cardinality aggregator as sub aggregator. The search query in the test is expected to throw CircuitBreakingException and ensure that the Circuit Breaker is reset back to zero.
In the concurrent search case, search thread spins up multiple index_searcher threads to search across multiple threads which comes from lucene. Each search thread has an associated SearchContext that contains the releasables object(in this case the releasables are GlobalOrdinalsStringTermsAggregator and CardinalityAggregator per slice). When the search operation is getting executed, the memory for operations during search are allocated by the BigArrays and accounted by the CircuitBreaker. When the CircuitBreakingException is thrown by one of the index_searcher threads, lucene doesn't wait for the other threads to complete execution and the exception is thrown to the search thread. The SearchContext.close() is then called that closes the releasables and all the aggregators. However, in the interim if there is any allocation on the BigArrays by another index_searcher thread, that will not be accounted by the CircuitBreaker as SearchContext is already closed. This leads to memory leak in the test.

This theory is validated by adding a sleep before throwing the exception which solves the issue: neetikasinghal@f38531a

@neetikasinghal
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The solution for the memory leak can be solved by one of the following choices:

  1. Early terminate the slices for concurrent search if CircuitBreakingException is thrown. If there is CircuitBreakingException exception, thrown by one of the slices, then a flag maintained in SearchContext is set and thus the other slices are terminated early, hence avoiding the memory leak. For reference, https://github.com/opensearch-project/OpenSearch/pull/11731/files shows a draft implementation of the solution (Validated by 500 successful test runs).
    This solution is limited to CircuitBreakingException and there could be memory leaks with other exception types that have not been yet discovered. Also, there can be a race condition in this case also, where one of the index_searcher thread has reached to an allocation stage when the other thread has thrown an exception leading to memory leak. This is hence not a recommended solution.

  2. When operations are parallelized, like query rewrite, or search, or createWeight, one of the tasks may throw an exception. In that case lucene doesn't wait for all tasks to be completed before re-throwing the exception that were caught. Lucene has already solved this via apache/lucene@1200ecc. However, this commit is not present in lucene 9.8.0 but in lucene 9.9.0
    We need to upgrade to lucene 9.9.0 to take this commit in OpenSearch. If we take this commit, we should be able to solve this and any other issue that can potentially exist in not waiting for other threads to complete although one of the threads has already thrown an exception. I validated this making a new class TaskExecutor.java in OpenSearch and adding a simplistic logic to wait for other threads as follows:

class TaskExecutor {
    private final Executor executor;

    private volatile boolean circuitBreakerTripped;

    private ExecutionException e;

    TaskExecutor(Executor executor) {
        this.executor = Objects.requireNonNull(executor, "Executor is null");
        circuitBreakerTripped = false;
    }

    /**
     * Execute all the tasks provided as an argument, wait for them to complete and return the
     * obtained results.
     *
     * @param tasks the tasks to execute
     * @return a list containing the results from the tasks execution
     * @param <T> the return type of the task execution
     */
    final <T> List<T> invokeAll(Collection<RunnableFuture<T>> tasks) throws IOException {
        for (Runnable task : tasks) {
            executor.execute(task);
        }
        final List<T> results = new ArrayList<>();
        for (Future<T> future : tasks) {
            try {
                results.add(future.get());
            } catch (InterruptedException e) {
                throw new ThreadInterruptedException(e);
            } catch (ExecutionException e) {
                circuitBreakerTripped = true;
                this.e = e;
                // throw IOUtils.rethrowAlways(e.getCause());
            }
        }
        if (circuitBreakerTripped) {
            throw IOUtils.rethrowAlways(e.getCause());
        }
        return results;
    }
}

The above solution is also validated by 500 successful test runs.

Hence, I would recommend option 2, which also looks to be a cleaner solution coming from upstream.

@sohami @andrross @reta I would love to hear your thoughts on this.

@sohami
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sohami commented Jan 4, 2024

Thanks @neetikasinghal for looking into this. Taking Lucene side of changes makes sense to me instead of re-implementing it in OpenSearch. Also there is a follow-up PR in lucene to make it cancel already running tasks too. Ref here which will further improve it. We can keep an eye on that for future releases as an improvement.

@reta
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reta commented Jan 4, 2024

sohami @andrross @reta I would love to hear your thoughts on this.

Thanks a lot @neetikasinghal , I side with you (and @sohami ) here to rely on Apache Lucene 9.9.x (the #11421 should be integrated soon).

@ashking94
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The reported test have failed in one of the PR builds - https://build.ci.opensearch.org/job/gradle-check/32188/. Reopening this issue.

@neetikasinghal
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neetikasinghal commented Jan 17, 2024

I am able to reproduce this with seed: -Dtests.seed=998015FD102898B9.
This is not specific to concurrent search though, I am able to reproduce this by turning off the concurrent search flag as well.
This looks to be a different problem than before, the nested exception is as follows:

Expected: <0L>
     but: was <568L>
		at org.hamcrest.MatcherAssert.assertThat(MatcherAssert.java:18)
		at org.junit.Assert.assertThat(Assert.java:964)
		at org.opensearch.test.InternalTestCluster.lambda$ensureEstimatedStats$42(InternalTestCluster.java:2705)
		at org.opensearch.test.OpenSearchTestCase.assertBusy(OpenSearchTestCase.java:1077)
		... 44 more


java.lang.RuntimeException: 1 arrays have not been released

	at org.opensearch.common.util.MockBigArrays.ensureAllArraysAreReleased(MockBigArrays.java:88)
	at org.opensearch.test.OpenSearchTestCase.checkStaticState(OpenSearchTestCase.java:633)
	at org.opensearch.test.OpenSearchTestCase.after(OpenSearchTestCase.java:431)
	at java.base/jdk.internal.reflect.NativeMethodAccessorImpl.invoke0(Native Method)
	at java.base/jdk.internal.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAccessorImpl.java:62)
	at java.base/jdk.internal.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43)
	at java.base/java.lang.reflect.Method.invoke(Method.java:566)
	at com.carrotsearch.randomizedtesting.RandomizedRunner.invoke(RandomizedRunner.java:1750)
	at com.carrotsearch.randomizedtesting.RandomizedRunner$10.evaluate(RandomizedRunner.java:996)
	at com.carrotsearch.randomizedtesting.rules.StatementAdapter.evaluate(StatementAdapter.java:36)
	at org.junit.rules.RunRules.evaluate(RunRules.java:20)
	at org.apache.lucene.tests.util.TestRuleSetupTeardownChained$1.evaluate(TestRuleSetupTeardownChained.java:48)
	at org.apache.lucene.tests.util.AbstractBeforeAfterRule$1.evaluate(AbstractBeforeAfterRule.java:43)
	at org.apache.lucene.tests.util.TestRuleThreadAndTestName$1.evaluate(TestRuleThreadAndTestName.java:45)
	at org.apache.lucene.tests.util.TestRuleIgnoreAfterMaxFailures$1.evaluate(TestRuleIgnoreAfterMaxFailures.java:60)
	at org.apache.lucene.tests.util.TestRuleMarkFailure$1.evaluate(TestRuleMarkFailure.java:44)
	at org.junit.rules.RunRules.evaluate(RunRules.java:20)
	at com.carrotsearch.randomizedtesting.rules.StatementAdapter.evaluate(StatementAdapter.java:36)
	at com.carrotsearch.randomizedtesting.ThreadLeakControl$StatementRunner.run(ThreadLeakControl.java:368)
	at com.carrotsearch.randomizedtesting.ThreadLeakControl.forkTimeoutingTask(ThreadLeakControl.java:817)
	at com.carrotsearch.randomizedtesting.ThreadLeakControl$3.evaluate(ThreadLeakControl.java:468)
	at com.carrotsearch.randomizedtesting.RandomizedRunner.runSingleTest(RandomizedRunner.java:947)
	at com.carrotsearch.randomizedtesting.RandomizedRunner$5.evaluate(RandomizedRunner.java:832)
	at com.carrotsearch.randomizedtesting.RandomizedRunner$6.evaluate(RandomizedRunner.java:883)
	at com.carrotsearch.randomizedtesting.RandomizedRunner$7.evaluate(RandomizedRunner.java:894)
	at org.apache.lucene.tests.util.AbstractBeforeAfterRule$1.evaluate(AbstractBeforeAfterRule.java:43)
	at com.carrotsearch.randomizedtesting.rules.StatementAdapter.evaluate(StatementAdapter.java:36)
	at org.apache.lucene.tests.util.TestRuleStoreClassName$1.evaluate(TestRuleStoreClassName.java:38)
	at com.carrotsearch.randomizedtesting.rules.NoShadowingOrOverridesOnMethodsRule$1.evaluate(NoShadowingOrOverridesOnMethodsRule.java:40)
	at com.carrotsearch.randomizedtesting.rules.NoShadowingOrOverridesOnMethodsRule$1.evaluate(NoShadowingOrOverridesOnMethodsRule.java:40)
	at com.carrotsearch.randomizedtesting.rules.StatementAdapter.evaluate(StatementAdapter.java:36)
	at com.carrotsearch.randomizedtesting.rules.StatementAdapter.evaluate(StatementAdapter.java:36)
	at org.apache.lucene.tests.util.TestRuleAssertionsRequired$1.evaluate(TestRuleAssertionsRequired.java:53)
	at org.apache.lucene.tests.util.AbstractBeforeAfterRule$1.evaluate(AbstractBeforeAfterRule.java:43)
	at org.apache.lucene.tests.util.TestRuleMarkFailure$1.evaluate(TestRuleMarkFailure.java:44)
	at org.apache.lucene.tests.util.TestRuleIgnoreAfterMaxFailures$1.evaluate(TestRuleIgnoreAfterMaxFailures.java:60)
	at org.apache.lucene.tests.util.TestRuleIgnoreTestSuites$1.evaluate(TestRuleIgnoreTestSuites.java:47)
	at org.junit.rules.RunRules.evaluate(RunRules.java:20)
	at com.carrotsearch.randomizedtesting.rules.StatementAdapter.evaluate(StatementAdapter.java:36)
	at com.carrotsearch.randomizedtesting.ThreadLeakControl$StatementRunner.run(ThreadLeakControl.java:368)
	at java.base/java.lang.Thread.run(Thread.java:829)

I will dive deeper into this to check further.

@neetikasinghal
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neetikasinghal commented Jan 19, 2024

I am able to figure out the root-cause of the memory leak happening.

During the execution of the index search in the test, GlobalOrdinalsStringTermsAggregator is initialized that has an initialization of a collection strategy in its constructor.

The collection strategy initialization flow is as follows:

new RemapGlobalOrds() -> LongKeyedBucketOrds.build() -> new FromSingle(bigArrays) -> new ReorganizingLongHash(bigArrays) -> ReorganizingLongHash constructor

In the ReorganizingLongHash's constructor, there are two big arrays initialized whose memory is accounted by the Circuit Breaker here.

In the happy case scenario, the GlobalOrdinalsStringTermsAggregator is initialized which initializes the collectionStrategy and the arrays in ReorganizingLongHash's constructor are accounted by the CircuitBreaker. When a CircuitBreakingException is hit on any other code flow, the SearchContext.close() is called which further calls close on GlobalOrdinalsStringTermsAggregator and since the collectionStrategy is not null, close is called on ReorganizingLongHash's arrays as well, accounted by the CircuitBreaker and hence there is no memory leak.
However, when the CircuitBreakingException happens during the initialization of the keys array in ReorganizingLongHash's constructor, then the collection strategy is null and hence the ReorganizingLongHash's close is not called which leads to tables array in ReorganizingLongHash's constructor not getting closed, not accounted by the CircuitBreaker and hence leading to memory leak.

In order to deal with this, close needs to be explicitly called in ReorganizingLongHash's constructor when an exception is encountered. This is done as part of the PR #11953

@neetikasinghal
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@reta @andrross would appreciate your feedback on this.

@reta reta added v3.0.0 Issues and PRs related to version 3.0.0 v2.12.0 Issues and PRs related to version 2.12.0 labels Jan 20, 2024
rayshrey pushed a commit to rayshrey/OpenSearch that referenced this issue Mar 18, 2024
shiv0408 pushed a commit to Gaurav614/OpenSearch that referenced this issue Apr 25, 2024
…10752)

Relates opensearch-project#10154

Signed-off-by: Andrew Ross <andrross@amazon.com>
Signed-off-by: Shivansh Arora <hishiv@amazon.com>
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Labels
bug Something isn't working flaky-test Random test failure that succeeds on second run untriaged v2.12.0 Issues and PRs related to version 2.12.0 v3.0.0 Issues and PRs related to version 3.0.0
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